Gene : Glyma.01G234300 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR22880:SF55 - PHD FINGER FAMILY PROTEIN Genomic Order:  2343
Name:  ? Glyma.01G234300 Secondary Identifier:  ? PAC:30543662
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.01G234300 0.5kb upstream 0.5kb upstream 9501 true Chr01: 56040889-56050389 Glycine max
Glyma.01G234300 0.5kb upstream 0.5kb upstream 500 false Chr01: 56049890-56050389 Glycine max
Glyma.01G234300 0.5kb downstream 0.5kb downstream 9501 true Chr01: 56040389-56049889 Glycine max
Glyma.01G234300 0.5kb downstream 0.5kb downstream 500 false Chr01: 56040389-56040888 Glycine max
Glyma.01G234300 1.0kb upstream 1.0kb upstream 10001 true Chr01: 56040889-56050889 Glycine max
Glyma.01G234300 1.0kb upstream 1.0kb upstream 1000 false Chr01: 56049890-56050889 Glycine max
Glyma.01G234300 1.0kb downstream 1.0kb downstream 10001 true Chr01: 56039889-56049889 Glycine max
Glyma.01G234300 1.0kb downstream 1.0kb downstream 1000 false Chr01: 56039889-56040888 Glycine max
Glyma.01G234300 2.0kb upstream 2.0kb upstream 11001 true Chr01: 56040889-56051889 Glycine max
Glyma.01G234300 2.0kb upstream 2.0kb upstream 2000 false Chr01: 56049890-56051889 Glycine max
Glyma.01G234300 2.0kb downstream 2.0kb downstream 11001 true Chr01: 56038889-56049889 Glycine max
Glyma.01G234300 2.0kb downstream 2.0kb downstream 2000 false Chr01: 56038889-56040888 Glycine max
Glyma.01G234300 5.0kb upstream 5.0kb upstream 14001 true Chr01: 56040889-56054889 Glycine max
Glyma.01G234300 5.0kb upstream 5.0kb upstream 5000 false Chr01: 56049890-56054889 Glycine max
Glyma.01G234300 5.0kb downstream 5.0kb downstream 14001 true Chr01: 56035889-56049889 Glycine max
Glyma.01G234300 5.0kb downstream 5.0kb downstream 5000 false Chr01: 56035889-56040888 Glycine max
Glyma.01G234300 10.0kb upstream 10.0kb upstream 19001 true Chr01: 56040889-56059889 Glycine max
Glyma.01G234300 10.0kb upstream 10.0kb upstream 10000 false Chr01: 56049890-56059889 Glycine max
Glyma.01G234300 10.0kb downstream 10.0kb downstream 19001 true Chr01: 56030889-56049889 Glycine max
Glyma.01G234300 10.0kb downstream 10.0kb downstream 10000 false Chr01: 56030889-56040888 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122310427 5265 Fabidae View MSA
124073153 5270 Rosid View MSA
123746144 5271 Pentapetalae View MSA
122794175 5272 Eudicot View MSA
122049832 5273 Angiosperm View MSA
121311609 5274 Embryophyte View MSA
123348884 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 11.9863 0.0 44.3793    
cufflinks 8.78892 0.0 27.0941    
cufflinks 16.3996 0.0 66.5   High
cufflinks 9.49217 0.0 29.3371    
cufflinks 5.41165 0.0 20.5451   Low
cufflinks 7.58367 0.0 28.4984    
cufflinks 14.966 0.0 58.0977   High
cufflinks 7.59877 0.0 29.41    
cufflinks 7.64658 0.0 29.5507    
cufflinks 2.726        
cufflinks 2.794        
cufflinks 3.84       High
cufflinks 1.857       Low
cufflinks 1.404       Low
cufflinks 3.877       High
cufflinks 3.448        
cufflinks 3.131        
cufflinks 2.951        
cufflinks 3.422        
cufflinks 3.321        
cufflinks 2.637        
cufflinks 3.398        
cufflinks 3.423        
cufflinks 2.898        
cufflinks 3.265        
cufflinks 3.399        

0 Strain