Gene : Glyma.01G245100 G. max Wm82.a2.v1
Defline:  (1 of 6) PTHR10625//PTHR10625:SF127 - HISTONE DEACETYLASE Genomic Order:  2451
Name:  ? Glyma.01G245100 Secondary Identifier:  ? PAC:30542817
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.01G245100 0.5kb upstream 0.5kb upstream 8016 true Chr01: 56739736-56747751 Glycine max
Glyma.01G245100 0.5kb upstream 0.5kb upstream 500 false Chr01: 56747252-56747751 Glycine max
Glyma.01G245100 0.5kb downstream 0.5kb downstream 8016 true Chr01: 56739236-56747251 Glycine max
Glyma.01G245100 0.5kb downstream 0.5kb downstream 500 false Chr01: 56739236-56739735 Glycine max
Glyma.01G245100 1.0kb upstream 1.0kb upstream 8516 true Chr01: 56739736-56748251 Glycine max
Glyma.01G245100 1.0kb upstream 1.0kb upstream 1000 false Chr01: 56747252-56748251 Glycine max
Glyma.01G245100 1.0kb downstream 1.0kb downstream 8516 true Chr01: 56738736-56747251 Glycine max
Glyma.01G245100 1.0kb downstream 1.0kb downstream 1000 false Chr01: 56738736-56739735 Glycine max
Glyma.01G245100 2.0kb upstream 2.0kb upstream 9516 true Chr01: 56739736-56749251 Glycine max
Glyma.01G245100 2.0kb upstream 2.0kb upstream 2000 false Chr01: 56747252-56749251 Glycine max
Glyma.01G245100 2.0kb downstream 2.0kb downstream 9516 true Chr01: 56737736-56747251 Glycine max
Glyma.01G245100 2.0kb downstream 2.0kb downstream 2000 false Chr01: 56737736-56739735 Glycine max
Glyma.01G245100 5.0kb upstream 5.0kb upstream 12516 true Chr01: 56739736-56752251 Glycine max
Glyma.01G245100 5.0kb upstream 5.0kb upstream 5000 false Chr01: 56747252-56752251 Glycine max
Glyma.01G245100 5.0kb downstream 5.0kb downstream 12516 true Chr01: 56734736-56747251 Glycine max
Glyma.01G245100 5.0kb downstream 5.0kb downstream 5000 false Chr01: 56734736-56739735 Glycine max
Glyma.01G245100 10.0kb upstream 10.0kb upstream 17516 true Chr01: 56739736-56757251 Glycine max
Glyma.01G245100 10.0kb upstream 10.0kb upstream 10000 false Chr01: 56747252-56757251 Glycine max
Glyma.01G245100 10.0kb downstream 10.0kb downstream 17516 true Chr01: 56729736-56747251 Glycine max
Glyma.01G245100 10.0kb downstream 10.0kb downstream 10000 false Chr01: 56729736-56739735 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122297167 5265 Fabidae View MSA
124035929 5270 Rosid View MSA
123742951 5271 Pentapetalae View MSA
122788730 5272 Eudicot View MSA
122042529 5273 Angiosperm View MSA
123429001 5275 Viridiplantae View MSA
121349926 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 9.0358 0.0 31.1117    
cufflinks 19.6681 0.0 67.5087   High
cufflinks 5.58784 0.0 21.1636   Low
cufflinks 12.5587 0.0 43.2551    
cufflinks 16.775 0.0 55.892    
cufflinks 10.7161 0.0 33.6306    
cufflinks 17.5289 0.0 59.0241    
cufflinks 12.8162 0.0 43.9701    
cufflinks 9.84598 0.0 31.3643    
cufflinks 1.47        
cufflinks 0.215       Low
cufflinks 0.829        
cufflinks 1.612        
cufflinks 2.226       High
cufflinks 0.282       Low
cufflinks 1.54        
cufflinks 0.446        
cufflinks 1.198        
cufflinks 2.225       High
cufflinks 1.577        
cufflinks 0.333       Low
cufflinks 1.513        
cufflinks 1.556        
cufflinks 0.215       Low
cufflinks 1.46        
cufflinks 0.499        

0 Strain