Gene : Glyma.01G243900 G. max Wm82.a2.v1
Defline:  (1 of 1) PTHR11076:SF12 - DNA REPAIR PROTEIN REV1 Genomic Order:  2439
Name:  ? Glyma.01G243900 Secondary Identifier:  ? PAC:30544108
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.01G243900 0.5kb upstream 0.5kb upstream 13144 true Chr01: 56647346-56660489 Glycine max
Glyma.01G243900 0.5kb upstream 0.5kb upstream 500 false Chr01: 56647346-56647845 Glycine max
Glyma.01G243900 0.5kb downstream 0.5kb downstream 13144 true Chr01: 56647846-56660989 Glycine max
Glyma.01G243900 0.5kb downstream 0.5kb downstream 500 false Chr01: 56660490-56660989 Glycine max
Glyma.01G243900 1.0kb upstream 1.0kb upstream 13644 true Chr01: 56646846-56660489 Glycine max
Glyma.01G243900 1.0kb upstream 1.0kb upstream 1000 false Chr01: 56646846-56647845 Glycine max
Glyma.01G243900 1.0kb downstream 1.0kb downstream 13644 true Chr01: 56647846-56661489 Glycine max
Glyma.01G243900 1.0kb downstream 1.0kb downstream 1000 false Chr01: 56660490-56661489 Glycine max
Glyma.01G243900 2.0kb upstream 2.0kb upstream 14644 true Chr01: 56645846-56660489 Glycine max
Glyma.01G243900 2.0kb upstream 2.0kb upstream 2000 false Chr01: 56645846-56647845 Glycine max
Glyma.01G243900 2.0kb downstream 2.0kb downstream 14644 true Chr01: 56647846-56662489 Glycine max
Glyma.01G243900 2.0kb downstream 2.0kb downstream 2000 false Chr01: 56660490-56662489 Glycine max
Glyma.01G243900 5.0kb upstream 5.0kb upstream 17644 true Chr01: 56642846-56660489 Glycine max
Glyma.01G243900 5.0kb upstream 5.0kb upstream 5000 false Chr01: 56642846-56647845 Glycine max
Glyma.01G243900 5.0kb downstream 5.0kb downstream 17644 true Chr01: 56647846-56665489 Glycine max
Glyma.01G243900 5.0kb downstream 5.0kb downstream 5000 false Chr01: 56660490-56665489 Glycine max
Glyma.01G243900 10.0kb upstream 10.0kb upstream 22644 true Chr01: 56637846-56660489 Glycine max
Glyma.01G243900 10.0kb upstream 10.0kb upstream 10000 false Chr01: 56637846-56647845 Glycine max
Glyma.01G243900 10.0kb downstream 10.0kb downstream 22644 true Chr01: 56647846-56670489 Glycine max
Glyma.01G243900 10.0kb downstream 10.0kb downstream 10000 false Chr01: 56660490-56670489 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122306919 5265 Fabidae View MSA
124061575 5270 Rosid View MSA
123740211 5271 Pentapetalae View MSA
122789510 5272 Eudicot View MSA
122041911 5273 Angiosperm View MSA
121346043 5274 Embryophyte View MSA
123380311 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.52819 0.0 9.91345    
cufflinks 2.32129 0.0 9.3196    
cufflinks 3.14835 0.0 12.9627    
cufflinks 1.87108 0.0 7.98284    
cufflinks 2.10949 0.0 8.7015    
cufflinks 3.16355 0.0 11.8082    
cufflinks 3.99057 0.0 12.3652   High
cufflinks 1.33367 0.0 5.38196   Low
cufflinks 2.48084 0.0 11.7426    
cufflinks 0.099     Low Low
cufflinks 0.382        
cufflinks 0.389        
cufflinks 0.28        
cufflinks 0.264        
cufflinks 0.242        
cufflinks 0.376        
cufflinks 0.226        
cufflinks 0.483       High
cufflinks 0.446        
cufflinks 0.376        
cufflinks 0.273        
cufflinks 0.417        
cufflinks 0.412        
cufflinks 0.536       High
cufflinks 0.341        
cufflinks 0.252        

0 Strain