Gene : Glyma.18G272100 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR31673:SF2 - COBRA-LIKE PROTEIN 4 Genomic Order:  2721
Name:  ? Glyma.18G272100 Secondary Identifier:  ? PAC:30557671
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.18G272100 0.5kb upstream 0.5kb upstream 3959 true Chr18: 55506268-55510226 Glycine max
Glyma.18G272100 0.5kb upstream 0.5kb upstream 500 false Chr18: 55509727-55510226 Glycine max
Glyma.18G272100 0.5kb downstream 0.5kb downstream 3959 true Chr18: 55505768-55509726 Glycine max
Glyma.18G272100 0.5kb downstream 0.5kb downstream 500 false Chr18: 55505768-55506267 Glycine max
Glyma.18G272100 1.0kb upstream 1.0kb upstream 4459 true Chr18: 55506268-55510726 Glycine max
Glyma.18G272100 1.0kb upstream 1.0kb upstream 1000 false Chr18: 55509727-55510726 Glycine max
Glyma.18G272100 1.0kb downstream 1.0kb downstream 4459 true Chr18: 55505268-55509726 Glycine max
Glyma.18G272100 1.0kb downstream 1.0kb downstream 1000 false Chr18: 55505268-55506267 Glycine max
Glyma.18G272100 2.0kb upstream 2.0kb upstream 5459 true Chr18: 55506268-55511726 Glycine max
Glyma.18G272100 2.0kb upstream 2.0kb upstream 2000 false Chr18: 55509727-55511726 Glycine max
Glyma.18G272100 2.0kb downstream 2.0kb downstream 5459 true Chr18: 55504268-55509726 Glycine max
Glyma.18G272100 2.0kb downstream 2.0kb downstream 2000 false Chr18: 55504268-55506267 Glycine max
Glyma.18G272100 5.0kb upstream 5.0kb upstream 8459 true Chr18: 55506268-55514726 Glycine max
Glyma.18G272100 5.0kb upstream 5.0kb upstream 5000 false Chr18: 55509727-55514726 Glycine max
Glyma.18G272100 5.0kb downstream 5.0kb downstream 8459 true Chr18: 55501268-55509726 Glycine max
Glyma.18G272100 5.0kb downstream 5.0kb downstream 5000 false Chr18: 55501268-55506267 Glycine max
Glyma.18G272100 10.0kb upstream 10.0kb upstream 13459 true Chr18: 55506268-55519726 Glycine max
Glyma.18G272100 10.0kb upstream 10.0kb upstream 10000 false Chr18: 55509727-55519726 Glycine max
Glyma.18G272100 10.0kb downstream 10.0kb downstream 13459 true Chr18: 55496268-55509726 Glycine max
Glyma.18G272100 10.0kb downstream 10.0kb downstream 10000 false Chr18: 55496268-55506267 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122311331 5265 Fabidae View MSA
124068379 5270 Rosid View MSA
123742644 5271 Pentapetalae View MSA
122793742 5272 Eudicot View MSA
122043541 5273 Angiosperm View MSA
121349086 5274 Embryophyte View MSA
123381159 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 10.014 0.0 35.1508    
cufflinks 33.4086 0.0 154.866 High  
cufflinks 3.69275 0.0 12.6025   Low
cufflinks 74.9692 0.0 435.022 High High
cufflinks 12.6455 0.0 46.7639    
cufflinks 67.3472 0.0 448.71 High High
cufflinks 5.63215 0.0 33.9778   Low
cufflinks 79.3681 0.0 539.763 High High
cufflinks 17.8803 0.0 169.449    
cufflinks 16.377     High High
cufflinks 0.531        
cufflinks 0.945        
cufflinks 2.982        
cufflinks 0.314       Low
cufflinks 0.296       Low
cufflinks 4.634        
cufflinks 4.587        
cufflinks 1.215        
cufflinks 15.702     High High
cufflinks 0.918        
cufflinks 1.05        
cufflinks 1.697        
cufflinks 1.997        
cufflinks 0.432       Low
cufflinks 2.595        
cufflinks 1.224        

0 Strain