Gene : Glyma.01G182100 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR22844//PTHR22844:SF211 - F-BOX AND WD40 DOMAIN PROTEIN Genomic Order:  1821
Name:  ? Glyma.01G182100 Secondary Identifier:  ? PAC:30542099
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.01G182100 0.5kb upstream 0.5kb upstream 2336 true Chr01: 51781924-51784259 Glycine max
Glyma.01G182100 0.5kb upstream 0.5kb upstream 500 false Chr01: 51783760-51784259 Glycine max
Glyma.01G182100 0.5kb downstream 0.5kb downstream 2336 true Chr01: 51781424-51783759 Glycine max
Glyma.01G182100 0.5kb downstream 0.5kb downstream 500 false Chr01: 51781424-51781923 Glycine max
Glyma.01G182100 1.0kb upstream 1.0kb upstream 2836 true Chr01: 51781924-51784759 Glycine max
Glyma.01G182100 1.0kb upstream 1.0kb upstream 1000 false Chr01: 51783760-51784759 Glycine max
Glyma.01G182100 1.0kb downstream 1.0kb downstream 2836 true Chr01: 51780924-51783759 Glycine max
Glyma.01G182100 1.0kb downstream 1.0kb downstream 1000 false Chr01: 51780924-51781923 Glycine max
Glyma.01G182100 2.0kb upstream 2.0kb upstream 3836 true Chr01: 51781924-51785759 Glycine max
Glyma.01G182100 2.0kb upstream 2.0kb upstream 2000 false Chr01: 51783760-51785759 Glycine max
Glyma.01G182100 2.0kb downstream 2.0kb downstream 3836 true Chr01: 51779924-51783759 Glycine max
Glyma.01G182100 2.0kb downstream 2.0kb downstream 2000 false Chr01: 51779924-51781923 Glycine max
Glyma.01G182100 5.0kb upstream 5.0kb upstream 6836 true Chr01: 51781924-51788759 Glycine max
Glyma.01G182100 5.0kb upstream 5.0kb upstream 5000 false Chr01: 51783760-51788759 Glycine max
Glyma.01G182100 5.0kb downstream 5.0kb downstream 6836 true Chr01: 51776924-51783759 Glycine max
Glyma.01G182100 5.0kb downstream 5.0kb downstream 5000 false Chr01: 51776924-51781923 Glycine max
Glyma.01G182100 10.0kb upstream 10.0kb upstream 11836 true Chr01: 51781924-51793759 Glycine max
Glyma.01G182100 10.0kb upstream 10.0kb upstream 10000 false Chr01: 51783760-51793759 Glycine max
Glyma.01G182100 10.0kb downstream 10.0kb downstream 11836 true Chr01: 51771924-51783759 Glycine max
Glyma.01G182100 10.0kb downstream 10.0kb downstream 10000 false Chr01: 51771924-51781923 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122309073 5265 Fabidae View MSA
124072112 5270 Rosid View MSA
123752905 5271 Pentapetalae View MSA
122794540 5272 Eudicot View MSA
122049001 5273 Angiosperm View MSA
121349705 5274 Embryophyte View MSA
123428719 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.033853 0.0 0.140123 Low  
cufflinks 0.0793808 0.0 0.316309 Low  
cufflinks 1.93357 0.0 6.35118   High
cufflinks 0.0249281 0.0 0.10554 Low  
cufflinks 0.0839468 0.0 0.333105 Low  
cufflinks 0.0418787 0.0 0.171222 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0695214 0.0 0.278403 Low  
cufflinks 0.181813 0.0 0.701222 Low  
cufflinks 0.153       Low
cufflinks 0.821       High
cufflinks 1.023       High
cufflinks 0.196        
cufflinks 0.129       Low
cufflinks 0.08       Low
cufflinks 0.687        
cufflinks 0.246        
cufflinks 0.653        
cufflinks 0.16       Low
cufflinks 0.597        
cufflinks 0.513        
cufflinks 0.513        
cufflinks 0.378        
cufflinks 0.651        
cufflinks 0.482        
cufflinks 0.655        

0 Strain