Gene : Glyma.01G185300 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR10804:SF82 - METHIONINE AMINOPEPTIDASE 1D, MITOCHONDRIAL Genomic Order:  1853
Name:  ? Glyma.01G185300 Secondary Identifier:  ? PAC:30542671
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.01G185300 0.5kb upstream 0.5kb upstream 7389 true Chr01: 52063744-52071132 Glycine max
Glyma.01G185300 0.5kb upstream 0.5kb upstream 500 false Chr01: 52070633-52071132 Glycine max
Glyma.01G185300 0.5kb downstream 0.5kb downstream 7389 true Chr01: 52063244-52070632 Glycine max
Glyma.01G185300 0.5kb downstream 0.5kb downstream 500 false Chr01: 52063244-52063743 Glycine max
Glyma.01G185300 1.0kb upstream 1.0kb upstream 7889 true Chr01: 52063744-52071632 Glycine max
Glyma.01G185300 1.0kb upstream 1.0kb upstream 1000 false Chr01: 52070633-52071632 Glycine max
Glyma.01G185300 1.0kb downstream 1.0kb downstream 7889 true Chr01: 52062744-52070632 Glycine max
Glyma.01G185300 1.0kb downstream 1.0kb downstream 1000 false Chr01: 52062744-52063743 Glycine max
Glyma.01G185300 2.0kb upstream 2.0kb upstream 8889 true Chr01: 52063744-52072632 Glycine max
Glyma.01G185300 2.0kb upstream 2.0kb upstream 2000 false Chr01: 52070633-52072632 Glycine max
Glyma.01G185300 2.0kb downstream 2.0kb downstream 8889 true Chr01: 52061744-52070632 Glycine max
Glyma.01G185300 2.0kb downstream 2.0kb downstream 2000 false Chr01: 52061744-52063743 Glycine max
Glyma.01G185300 5.0kb upstream 5.0kb upstream 11889 true Chr01: 52063744-52075632 Glycine max
Glyma.01G185300 5.0kb upstream 5.0kb upstream 5000 false Chr01: 52070633-52075632 Glycine max
Glyma.01G185300 5.0kb downstream 5.0kb downstream 11889 true Chr01: 52058744-52070632 Glycine max
Glyma.01G185300 5.0kb downstream 5.0kb downstream 5000 false Chr01: 52058744-52063743 Glycine max
Glyma.01G185300 10.0kb upstream 10.0kb upstream 16889 true Chr01: 52063744-52080632 Glycine max
Glyma.01G185300 10.0kb upstream 10.0kb upstream 10000 false Chr01: 52070633-52080632 Glycine max
Glyma.01G185300 10.0kb downstream 10.0kb downstream 16889 true Chr01: 52053744-52070632 Glycine max
Glyma.01G185300 10.0kb downstream 10.0kb downstream 10000 false Chr01: 52053744-52063743 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122308242 5265 Fabidae View MSA
124066441 5270 Rosid View MSA
123749440 5271 Pentapetalae View MSA
122791523 5272 Eudicot View MSA
122046775 5273 Angiosperm View MSA
123429177 5275 Viridiplantae View MSA
121348768 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 20.6618 0.0 55.2075   High
cufflinks 11.9957 0.0 32.2267    
cufflinks 4.57385 0.0 13.2962   Low
cufflinks 6.04379 0.0 17.0221    
cufflinks 7.95915 0.0 21.8861    
cufflinks 8.4566 0.0 23.1525    
cufflinks 4.80957 0.0 13.9605   Low
cufflinks 7.2574 0.0 20.0907    
cufflinks 6.16159 0.0 17.3335    
cufflinks 1.787        
cufflinks 0.558       Low
cufflinks 1.487        
cufflinks 2.645        
cufflinks 2.777        
cufflinks 0.971        
cufflinks 8.295     High High
cufflinks 0.774       Low
cufflinks 2.297        
cufflinks 3.291        
cufflinks 8.952     High High
cufflinks 0.813       Low
cufflinks 8.051     High High
cufflinks 6.892       High
cufflinks 0.7       Low
cufflinks 7.797     High High
cufflinks 0.919        

0 Strain