Gene : Glyma.18G273700 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR22870:SF170 - REGULATOR OF CHROMOSOME CONDENSATION FAMILY PROTEIN Genomic Order:  2737
Name:  ? Glyma.18G273700 Secondary Identifier:  ? PAC:30558452
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.18G273700 0.5kb upstream 0.5kb upstream 5769 true Chr18: 55647274-55653042 Glycine max
Glyma.18G273700 0.5kb upstream 0.5kb upstream 500 false Chr18: 55652543-55653042 Glycine max
Glyma.18G273700 0.5kb downstream 0.5kb downstream 5769 true Chr18: 55646774-55652542 Glycine max
Glyma.18G273700 0.5kb downstream 0.5kb downstream 500 false Chr18: 55646774-55647273 Glycine max
Glyma.18G273700 1.0kb upstream 1.0kb upstream 6269 true Chr18: 55647274-55653542 Glycine max
Glyma.18G273700 1.0kb upstream 1.0kb upstream 1000 false Chr18: 55652543-55653542 Glycine max
Glyma.18G273700 1.0kb downstream 1.0kb downstream 6269 true Chr18: 55646274-55652542 Glycine max
Glyma.18G273700 1.0kb downstream 1.0kb downstream 1000 false Chr18: 55646274-55647273 Glycine max
Glyma.18G273700 2.0kb upstream 2.0kb upstream 7269 true Chr18: 55647274-55654542 Glycine max
Glyma.18G273700 2.0kb upstream 2.0kb upstream 2000 false Chr18: 55652543-55654542 Glycine max
Glyma.18G273700 2.0kb downstream 2.0kb downstream 7269 true Chr18: 55645274-55652542 Glycine max
Glyma.18G273700 2.0kb downstream 2.0kb downstream 2000 false Chr18: 55645274-55647273 Glycine max
Glyma.18G273700 5.0kb upstream 5.0kb upstream 10269 true Chr18: 55647274-55657542 Glycine max
Glyma.18G273700 5.0kb upstream 5.0kb upstream 5000 false Chr18: 55652543-55657542 Glycine max
Glyma.18G273700 5.0kb downstream 5.0kb downstream 10269 true Chr18: 55642274-55652542 Glycine max
Glyma.18G273700 5.0kb downstream 5.0kb downstream 5000 false Chr18: 55642274-55647273 Glycine max
Glyma.18G273700 10.0kb upstream 10.0kb upstream 15269 true Chr18: 55647274-55662542 Glycine max
Glyma.18G273700 10.0kb upstream 10.0kb upstream 10000 false Chr18: 55652543-55662542 Glycine max
Glyma.18G273700 10.0kb downstream 10.0kb downstream 15269 true Chr18: 55637274-55652542 Glycine max
Glyma.18G273700 10.0kb downstream 10.0kb downstream 10000 false Chr18: 55637274-55647273 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122306091 5265 Fabidae View MSA
124066260 5270 Rosid View MSA
123748631 5271 Pentapetalae View MSA
122791533 5272 Eudicot View MSA
122046241 5273 Angiosperm View MSA
121310578 5274 Embryophyte View MSA
123348026 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.62086 0.0 26.398   High
cufflinks 2.26592 0.0 15.1494    
cufflinks 5.71178 0.0 30.0704   High
cufflinks 2.76159 0.0 18.2251    
cufflinks 1.41496 0.0 12.5227   Low
cufflinks 3.3272 0.0 19.0816    
cufflinks 1.37679 0.0 9.65654   Low
cufflinks 2.25511 0.0 13.7278    
cufflinks 1.88333 0.0 14.03    
cufflinks 0.108       Low
cufflinks 0.291        
cufflinks 0.244        
cufflinks 0.127       Low
cufflinks 0.091       Low
cufflinks 0.301        
cufflinks 0.236        
cufflinks 0.176        
cufflinks 0.278        
cufflinks 0.187        
cufflinks 0.252        
cufflinks 0.333       High
cufflinks 0.274        
cufflinks 0.245        
cufflinks 0.324        
cufflinks 0.22        
cufflinks 0.307        

0 Strain