Gene : Glyma.18G275400 G. max Wm82.a2.v1
Defline:  (1 of 3) PTHR12565:SF85 - TRANSCRIPTION FACTOR BIM3 Genomic Order:  2754
Name:  ? Glyma.18G275400 Secondary Identifier:  ? PAC:30556588
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.18G275400 0.5kb upstream 0.5kb upstream 4939 true Chr18: 55763985-55768923 Glycine max
Glyma.18G275400 0.5kb upstream 0.5kb upstream 500 false Chr18: 55763985-55764484 Glycine max
Glyma.18G275400 0.5kb downstream 0.5kb downstream 4939 true Chr18: 55764485-55769423 Glycine max
Glyma.18G275400 0.5kb downstream 0.5kb downstream 500 false Chr18: 55768924-55769423 Glycine max
Glyma.18G275400 1.0kb upstream 1.0kb upstream 5439 true Chr18: 55763485-55768923 Glycine max
Glyma.18G275400 1.0kb upstream 1.0kb upstream 1000 false Chr18: 55763485-55764484 Glycine max
Glyma.18G275400 1.0kb downstream 1.0kb downstream 5439 true Chr18: 55764485-55769923 Glycine max
Glyma.18G275400 1.0kb downstream 1.0kb downstream 1000 false Chr18: 55768924-55769923 Glycine max
Glyma.18G275400 2.0kb upstream 2.0kb upstream 6439 true Chr18: 55762485-55768923 Glycine max
Glyma.18G275400 2.0kb upstream 2.0kb upstream 2000 false Chr18: 55762485-55764484 Glycine max
Glyma.18G275400 2.0kb downstream 2.0kb downstream 6439 true Chr18: 55764485-55770923 Glycine max
Glyma.18G275400 2.0kb downstream 2.0kb downstream 2000 false Chr18: 55768924-55770923 Glycine max
Glyma.18G275400 5.0kb upstream 5.0kb upstream 9439 true Chr18: 55759485-55768923 Glycine max
Glyma.18G275400 5.0kb upstream 5.0kb upstream 5000 false Chr18: 55759485-55764484 Glycine max
Glyma.18G275400 5.0kb downstream 5.0kb downstream 9439 true Chr18: 55764485-55773923 Glycine max
Glyma.18G275400 5.0kb downstream 5.0kb downstream 5000 false Chr18: 55768924-55773923 Glycine max
Glyma.18G275400 10.0kb upstream 10.0kb upstream 14439 true Chr18: 55754485-55768923 Glycine max
Glyma.18G275400 10.0kb upstream 10.0kb upstream 10000 false Chr18: 55754485-55764484 Glycine max
Glyma.18G275400 10.0kb downstream 10.0kb downstream 14439 true Chr18: 55764485-55778923 Glycine max
Glyma.18G275400 10.0kb downstream 10.0kb downstream 10000 false Chr18: 55768924-55778923 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122300056 5265 Fabidae View MSA
124070966 5270 Rosid View MSA
123742904 5271 Pentapetalae View MSA
122797269 5272 Eudicot View MSA
122046881 5273 Angiosperm View MSA
121348142 5274 Embryophyte View MSA
123428440 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 6.77452 0.0 23.2627    
cufflinks 7.31691 0.0 28.8449    
cufflinks 8.7534 0.0 28.0771    
cufflinks 7.62471 0.0 25.3185    
cufflinks 5.86948 0.0 21.0007   Low
cufflinks 6.78388 0.0 23.3505    
cufflinks 10.6314 0.0 38.5652   High
cufflinks 7.1277 0.0 24.9687    
cufflinks 7.04404 0.0 23.9556    
cufflinks 0.892        
cufflinks 0.709       Low
cufflinks 1.542       High
cufflinks 0.9        
cufflinks 1.076        
cufflinks 1.045        
cufflinks 1.15        
cufflinks 0.49       Low
cufflinks 1.343        
cufflinks 1.363        
cufflinks 1.242        
cufflinks 0.949        
cufflinks 1.41        
cufflinks 1.321        
cufflinks 1.055        
cufflinks 1.154        
cufflinks 0.489       Low

0 Strain