Gene : Glyma.02G068100 G. max Wm82.a2.v1
Defline:  (1 of 67) PF05553 - Cotton fibre expressed protein (DUF761) Genomic Order:  681
Name:  ? Glyma.02G068100 Secondary Identifier:  ? PAC:30508423
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.02G068100 0.5kb upstream 0.5kb upstream 1765 true Chr02: 6001135-6002899 Glycine max
Glyma.02G068100 0.5kb upstream 0.5kb upstream 500 false Chr02: 6002400-6002899 Glycine max
Glyma.02G068100 0.5kb downstream 0.5kb downstream 1765 true Chr02: 6000635-6002399 Glycine max
Glyma.02G068100 0.5kb downstream 0.5kb downstream 500 false Chr02: 6000635-6001134 Glycine max
Glyma.02G068100 1.0kb upstream 1.0kb upstream 2265 true Chr02: 6001135-6003399 Glycine max
Glyma.02G068100 1.0kb upstream 1.0kb upstream 1000 false Chr02: 6002400-6003399 Glycine max
Glyma.02G068100 1.0kb downstream 1.0kb downstream 2265 true Chr02: 6000135-6002399 Glycine max
Glyma.02G068100 1.0kb downstream 1.0kb downstream 1000 false Chr02: 6000135-6001134 Glycine max
Glyma.02G068100 2.0kb upstream 2.0kb upstream 3265 true Chr02: 6001135-6004399 Glycine max
Glyma.02G068100 2.0kb upstream 2.0kb upstream 2000 false Chr02: 6002400-6004399 Glycine max
Glyma.02G068100 2.0kb downstream 2.0kb downstream 3265 true Chr02: 5999135-6002399 Glycine max
Glyma.02G068100 2.0kb downstream 2.0kb downstream 2000 false Chr02: 5999135-6001134 Glycine max
Glyma.02G068100 5.0kb upstream 5.0kb upstream 6265 true Chr02: 6001135-6007399 Glycine max
Glyma.02G068100 5.0kb upstream 5.0kb upstream 5000 false Chr02: 6002400-6007399 Glycine max
Glyma.02G068100 5.0kb downstream 5.0kb downstream 6265 true Chr02: 5996135-6002399 Glycine max
Glyma.02G068100 5.0kb downstream 5.0kb downstream 5000 false Chr02: 5996135-6001134 Glycine max
Glyma.02G068100 10.0kb upstream 10.0kb upstream 11265 true Chr02: 6001135-6012399 Glycine max
Glyma.02G068100 10.0kb upstream 10.0kb upstream 10000 false Chr02: 6002400-6012399 Glycine max
Glyma.02G068100 10.0kb downstream 10.0kb downstream 11265 true Chr02: 5991135-6002399 Glycine max
Glyma.02G068100 10.0kb downstream 10.0kb downstream 10000 false Chr02: 5991135-6001134 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122254678 5265 Fabidae View MSA
124070746 5270 Rosid View MSA
123749628 5271 Pentapetalae View MSA
122795982 5272 Eudicot View MSA
122049050 5273 Angiosperm View MSA
121311224 5274 Embryophyte View MSA
123348548 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 8.67075 0.0 25.0453   Low
cufflinks 9.75778 0.0 27.7284   Low
cufflinks 19.9269 0.0 53.5653    
cufflinks 221.57 0.0 734.911 High High
cufflinks 49.3493 0.0 133.194 High  
cufflinks 66.9359 0.0 184.84 High  
cufflinks 37.8209 0.0 101.139 High  
cufflinks 136.687 0.0 414.141 High High
cufflinks 61.6021 0.0 168.908 High  
cufflinks 106.634     High High
cufflinks 7.405     High  
cufflinks 4.601        
cufflinks 53.255     High High
cufflinks 13.14     High  
cufflinks 0.786       Low
cufflinks 23.032     High  
cufflinks 28.278     High  
cufflinks 7.17        
cufflinks 12.146     High  
cufflinks 31.221     High  
cufflinks 7.746     High  
cufflinks 27.642     High  
cufflinks 17.793     High  
cufflinks 6.118     High  
cufflinks 25.578     High  
cufflinks 10.578     High  

0 Strain