Gene : Glyma.02G067300 G. max Wm82.a2.v1
Defline:  (1 of 6) PTHR11594 - 40S RIBOSOMAL PROTEIN S27 Genomic Order:  673
Name:  ? Glyma.02G067300 Secondary Identifier:  ? PAC:30509011
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.02G067300 0.5kb upstream 0.5kb upstream 1728 true Chr02: 5954118-5955845 Glycine max
Glyma.02G067300 0.5kb upstream 0.5kb upstream 500 false Chr02: 5954118-5954617 Glycine max
Glyma.02G067300 0.5kb downstream 0.5kb downstream 1728 true Chr02: 5954618-5956345 Glycine max
Glyma.02G067300 0.5kb downstream 0.5kb downstream 500 false Chr02: 5955846-5956345 Glycine max
Glyma.02G067300 1.0kb upstream 1.0kb upstream 2228 true Chr02: 5953618-5955845 Glycine max
Glyma.02G067300 1.0kb upstream 1.0kb upstream 1000 false Chr02: 5953618-5954617 Glycine max
Glyma.02G067300 1.0kb downstream 1.0kb downstream 2228 true Chr02: 5954618-5956845 Glycine max
Glyma.02G067300 1.0kb downstream 1.0kb downstream 1000 false Chr02: 5955846-5956845 Glycine max
Glyma.02G067300 2.0kb upstream 2.0kb upstream 3228 true Chr02: 5952618-5955845 Glycine max
Glyma.02G067300 2.0kb upstream 2.0kb upstream 2000 false Chr02: 5952618-5954617 Glycine max
Glyma.02G067300 2.0kb downstream 2.0kb downstream 3228 true Chr02: 5954618-5957845 Glycine max
Glyma.02G067300 2.0kb downstream 2.0kb downstream 2000 false Chr02: 5955846-5957845 Glycine max
Glyma.02G067300 5.0kb upstream 5.0kb upstream 6228 true Chr02: 5949618-5955845 Glycine max
Glyma.02G067300 5.0kb upstream 5.0kb upstream 5000 false Chr02: 5949618-5954617 Glycine max
Glyma.02G067300 5.0kb downstream 5.0kb downstream 6228 true Chr02: 5954618-5960845 Glycine max
Glyma.02G067300 5.0kb downstream 5.0kb downstream 5000 false Chr02: 5955846-5960845 Glycine max
Glyma.02G067300 10.0kb upstream 10.0kb upstream 11228 true Chr02: 5944618-5955845 Glycine max
Glyma.02G067300 10.0kb upstream 10.0kb upstream 10000 false Chr02: 5944618-5954617 Glycine max
Glyma.02G067300 10.0kb downstream 10.0kb downstream 11228 true Chr02: 5954618-5965845 Glycine max
Glyma.02G067300 10.0kb downstream 10.0kb downstream 10000 false Chr02: 5955846-5965845 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041078 5273 Angiosperm View MSA
122314519 5265 Fabidae View MSA
124065866 5270 Rosid View MSA
123752077 5271 Pentapetalae View MSA
122796838 5272 Eudicot View MSA
121348120 5274 Embryophyte View MSA
123423805 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 9.00844 0.0 27.3988    
cufflinks 16.7563 0.0 47.015    
cufflinks 5.23064 0.0 17.0254   Low
cufflinks 7.8377 0.0 24.2366   Low
cufflinks 30.7013 0.0 82.5953 High High
cufflinks 22.7953 0.0 62.2855    
cufflinks 38.9808 0.0 104.137 High High
cufflinks 17.866 0.0 49.8328    
cufflinks 19.9379 0.0 55.0381 High  
cufflinks 11.309     High  
cufflinks 3.956        
cufflinks 5.93        
cufflinks 26.753     High High
cufflinks 46.685     High High
cufflinks 3.985        
cufflinks 4.22        
cufflinks 5.514        
cufflinks 7.356     High  
cufflinks 11.629     High  
cufflinks 3.141        
cufflinks 4.309        
cufflinks 3.802        
cufflinks 5.353        
cufflinks 4.124        
cufflinks 4.214        
cufflinks 6.049        

0 Strain