Gene : Glyma.02G073000 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR21087:SF4 - INACTIVE SHIKIMATE KINASE LIKE 1, CHLOROPLASTIC-RELATED Genomic Order:  730
Name:  ? Glyma.02G073000 Secondary Identifier:  ? PAC:30508959
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.02G073000 0.5kb upstream 0.5kb upstream 4041 true Chr02: 6386454-6390494 Glycine max
Glyma.02G073000 0.5kb upstream 0.5kb upstream 500 false Chr02: 6389995-6390494 Glycine max
Glyma.02G073000 0.5kb downstream 0.5kb downstream 4041 true Chr02: 6385954-6389994 Glycine max
Glyma.02G073000 0.5kb downstream 0.5kb downstream 500 false Chr02: 6385954-6386453 Glycine max
Glyma.02G073000 1.0kb upstream 1.0kb upstream 4541 true Chr02: 6386454-6390994 Glycine max
Glyma.02G073000 1.0kb upstream 1.0kb upstream 1000 false Chr02: 6389995-6390994 Glycine max
Glyma.02G073000 1.0kb downstream 1.0kb downstream 4541 true Chr02: 6385454-6389994 Glycine max
Glyma.02G073000 1.0kb downstream 1.0kb downstream 1000 false Chr02: 6385454-6386453 Glycine max
Glyma.02G073000 2.0kb upstream 2.0kb upstream 5541 true Chr02: 6386454-6391994 Glycine max
Glyma.02G073000 2.0kb upstream 2.0kb upstream 2000 false Chr02: 6389995-6391994 Glycine max
Glyma.02G073000 2.0kb downstream 2.0kb downstream 5541 true Chr02: 6384454-6389994 Glycine max
Glyma.02G073000 2.0kb downstream 2.0kb downstream 2000 false Chr02: 6384454-6386453 Glycine max
Glyma.02G073000 5.0kb upstream 5.0kb upstream 8541 true Chr02: 6386454-6394994 Glycine max
Glyma.02G073000 5.0kb upstream 5.0kb upstream 5000 false Chr02: 6389995-6394994 Glycine max
Glyma.02G073000 5.0kb downstream 5.0kb downstream 8541 true Chr02: 6381454-6389994 Glycine max
Glyma.02G073000 5.0kb downstream 5.0kb downstream 5000 false Chr02: 6381454-6386453 Glycine max
Glyma.02G073000 10.0kb upstream 10.0kb upstream 13541 true Chr02: 6386454-6399994 Glycine max
Glyma.02G073000 10.0kb upstream 10.0kb upstream 10000 false Chr02: 6389995-6399994 Glycine max
Glyma.02G073000 10.0kb downstream 10.0kb downstream 13541 true Chr02: 6376454-6389994 Glycine max
Glyma.02G073000 10.0kb downstream 10.0kb downstream 10000 false Chr02: 6376454-6386453 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122305408 5265 Fabidae View MSA
124073160 5270 Rosid View MSA
123746904 5271 Pentapetalae View MSA
122797267 5272 Eudicot View MSA
122046124 5273 Angiosperm View MSA
121349272 5274 Embryophyte View MSA
123425467 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 14.0911 0.0 56.2624   High
cufflinks 10.5899 0.0 44.4744    
cufflinks 6.34265 0.0 27.4165    
cufflinks 8.38101 0.0 34.0803    
cufflinks 3.42585 0.0 18.8817    
cufflinks 2.46669 0.0 12.1837   Low
cufflinks 12.574 0.0 46.541   High
cufflinks 5.67458 0.0 26.0731    
cufflinks 2.9588 0.0 16.9889   Low
cufflinks 0.524        
cufflinks 0.104       Low
cufflinks 0.817        
cufflinks 0.251        
cufflinks 0.168        
cufflinks 0.135        
cufflinks 2.44       High
cufflinks 0.213        
cufflinks 1.01        
cufflinks 0.982        
cufflinks 3.108       High
cufflinks 0.084       Low
cufflinks 2.572       High
cufflinks 2.23       High
cufflinks 0.099       Low
cufflinks 2.553       High
cufflinks 0.134        

0 Strain