Gene : Glyma.02G089900 G. max Wm82.a2.v1
Defline:  (1 of 18) PTHR11206:SF87 - MATE EFFLUX FAMILY PROTEIN-RELATED Genomic Order:  899
Name:  ? Glyma.02G089900 Secondary Identifier:  ? PAC:30506947
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.02G089900 0.5kb upstream 0.5kb upstream 5103 true Chr02: 7903639-7908741 Glycine max
Glyma.02G089900 0.5kb upstream 0.5kb upstream 500 false Chr02: 7908242-7908741 Glycine max
Glyma.02G089900 0.5kb downstream 0.5kb downstream 5103 true Chr02: 7903139-7908241 Glycine max
Glyma.02G089900 0.5kb downstream 0.5kb downstream 500 false Chr02: 7903139-7903638 Glycine max
Glyma.02G089900 1.0kb upstream 1.0kb upstream 5603 true Chr02: 7903639-7909241 Glycine max
Glyma.02G089900 1.0kb upstream 1.0kb upstream 1000 false Chr02: 7908242-7909241 Glycine max
Glyma.02G089900 1.0kb downstream 1.0kb downstream 5603 true Chr02: 7902639-7908241 Glycine max
Glyma.02G089900 1.0kb downstream 1.0kb downstream 1000 false Chr02: 7902639-7903638 Glycine max
Glyma.02G089900 2.0kb upstream 2.0kb upstream 6603 true Chr02: 7903639-7910241 Glycine max
Glyma.02G089900 2.0kb upstream 2.0kb upstream 2000 false Chr02: 7908242-7910241 Glycine max
Glyma.02G089900 2.0kb downstream 2.0kb downstream 6603 true Chr02: 7901639-7908241 Glycine max
Glyma.02G089900 2.0kb downstream 2.0kb downstream 2000 false Chr02: 7901639-7903638 Glycine max
Glyma.02G089900 5.0kb upstream 5.0kb upstream 9603 true Chr02: 7903639-7913241 Glycine max
Glyma.02G089900 5.0kb upstream 5.0kb upstream 5000 false Chr02: 7908242-7913241 Glycine max
Glyma.02G089900 5.0kb downstream 5.0kb downstream 9603 true Chr02: 7898639-7908241 Glycine max
Glyma.02G089900 5.0kb downstream 5.0kb downstream 5000 false Chr02: 7898639-7903638 Glycine max
Glyma.02G089900 10.0kb upstream 10.0kb upstream 14603 true Chr02: 7903639-7918241 Glycine max
Glyma.02G089900 10.0kb upstream 10.0kb upstream 10000 false Chr02: 7908242-7918241 Glycine max
Glyma.02G089900 10.0kb downstream 10.0kb downstream 14603 true Chr02: 7893639-7908241 Glycine max
Glyma.02G089900 10.0kb downstream 10.0kb downstream 10000 false Chr02: 7893639-7903638 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122250531 5265 Fabidae View MSA
124070136 5270 Rosid View MSA
123747121 5271 Pentapetalae View MSA
122794225 5272 Eudicot View MSA
122042479 5273 Angiosperm View MSA
121350842 5274 Embryophyte View MSA
123428088 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 16.6813 0.0 44.5682   High
cufflinks 0.272085 0.0 1.03706    
cufflinks 0.253972 0.0 0.971959    
cufflinks 1.29476 0.0 4.52095    
cufflinks 2.32304 0.0 7.56379    
cufflinks 2.35906 0.0 7.70235    
cufflinks 0.0795552 0.0 0.318584 Low Low
cufflinks 0.106644 0.0 0.422478 Low Low
cufflinks 0.061     Low  
cufflinks 0.029     Low  
cufflinks 0.201        
cufflinks 0.063     Low  
cufflinks 0.438        
cufflinks 0.259        
cufflinks 0.598        
cufflinks 0.003     Low Low
cufflinks 0.126        
cufflinks 9.511     High High
cufflinks 0.086     Low  
cufflinks 0.012     Low Low
cufflinks 0.226        
cufflinks 2.451       High
cufflinks 0.017     Low  
cufflinks 0.456        
cufflinks 0.008     Low Low

0 Strain