Gene : Glyma.02G087800 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR12599//PTHR12599:SF8 - PTERIN-4-ALPHA-CARBINOLAMINE DEHYDRATASE Genomic Order:  878
Name:  ? Glyma.02G087800 Secondary Identifier:  ? PAC:30509386
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.02G087800 0.5kb upstream 0.5kb upstream 3754 true Chr02: 7676883-7680636 Glycine max
Glyma.02G087800 0.5kb upstream 0.5kb upstream 500 false Chr02: 7680137-7680636 Glycine max
Glyma.02G087800 0.5kb downstream 0.5kb downstream 3754 true Chr02: 7676383-7680136 Glycine max
Glyma.02G087800 0.5kb downstream 0.5kb downstream 500 false Chr02: 7676383-7676882 Glycine max
Glyma.02G087800 1.0kb upstream 1.0kb upstream 4254 true Chr02: 7676883-7681136 Glycine max
Glyma.02G087800 1.0kb upstream 1.0kb upstream 1000 false Chr02: 7680137-7681136 Glycine max
Glyma.02G087800 1.0kb downstream 1.0kb downstream 4254 true Chr02: 7675883-7680136 Glycine max
Glyma.02G087800 1.0kb downstream 1.0kb downstream 1000 false Chr02: 7675883-7676882 Glycine max
Glyma.02G087800 2.0kb upstream 2.0kb upstream 5254 true Chr02: 7676883-7682136 Glycine max
Glyma.02G087800 2.0kb upstream 2.0kb upstream 2000 false Chr02: 7680137-7682136 Glycine max
Glyma.02G087800 2.0kb downstream 2.0kb downstream 5254 true Chr02: 7674883-7680136 Glycine max
Glyma.02G087800 2.0kb downstream 2.0kb downstream 2000 false Chr02: 7674883-7676882 Glycine max
Glyma.02G087800 5.0kb upstream 5.0kb upstream 8254 true Chr02: 7676883-7685136 Glycine max
Glyma.02G087800 5.0kb upstream 5.0kb upstream 5000 false Chr02: 7680137-7685136 Glycine max
Glyma.02G087800 5.0kb downstream 5.0kb downstream 8254 true Chr02: 7671883-7680136 Glycine max
Glyma.02G087800 5.0kb downstream 5.0kb downstream 5000 false Chr02: 7671883-7676882 Glycine max
Glyma.02G087800 10.0kb upstream 10.0kb upstream 13254 true Chr02: 7676883-7690136 Glycine max
Glyma.02G087800 10.0kb upstream 10.0kb upstream 10000 false Chr02: 7680137-7690136 Glycine max
Glyma.02G087800 10.0kb downstream 10.0kb downstream 13254 true Chr02: 7666883-7680136 Glycine max
Glyma.02G087800 10.0kb downstream 10.0kb downstream 10000 false Chr02: 7666883-7676882 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122310409 5265 Fabidae View MSA
124062939 5270 Rosid View MSA
123742816 5271 Pentapetalae View MSA
122797926 5272 Eudicot View MSA
122046446 5273 Angiosperm View MSA
121348467 5274 Embryophyte View MSA
123427509 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 42.2794 0.0 113.405 High High
cufflinks 11.8823 0.0 33.1883    
cufflinks 2.65047 0.0 9.02871    
cufflinks 3.66539 0.0 11.9432    
cufflinks 2.18535 0.0 7.54971    
cufflinks 4.41928 0.0 14.0051    
cufflinks 2.43864 0.0 8.31834    
cufflinks 3.01972 0.0 10.0724    
cufflinks 1.68534 0.0 5.95679    
cufflinks 1.471        
cufflinks 0.728        
cufflinks 0.817        
cufflinks 0.129       Low
cufflinks 0.116       Low
cufflinks 0.103       Low
cufflinks 14.522     High High
cufflinks 0.433        
cufflinks 1.355        
cufflinks 1.574        
cufflinks 13.945     High High
cufflinks 0.359        
cufflinks 11.73     High High
cufflinks 13.446     High High
cufflinks 0.577        
cufflinks 13.872     High High
cufflinks 0.505        

0 Strain