Gene : Glyma.02G040200 G. max Wm82.a2.v1
Genomic Order:  402 Name:  ? Glyma.02G040200
Secondary Identifier:  ? PAC:30509144
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.02G040200 0.5kb upstream 0.5kb upstream 1807 true Chr02: 3783254-3785060 Glycine max
Glyma.02G040200 0.5kb upstream 0.5kb upstream 500 false Chr02: 3784561-3785060 Glycine max
Glyma.02G040200 0.5kb downstream 0.5kb downstream 1807 true Chr02: 3782754-3784560 Glycine max
Glyma.02G040200 0.5kb downstream 0.5kb downstream 500 false Chr02: 3782754-3783253 Glycine max
Glyma.02G040200 1.0kb upstream 1.0kb upstream 2307 true Chr02: 3783254-3785560 Glycine max
Glyma.02G040200 1.0kb upstream 1.0kb upstream 1000 false Chr02: 3784561-3785560 Glycine max
Glyma.02G040200 1.0kb downstream 1.0kb downstream 2307 true Chr02: 3782254-3784560 Glycine max
Glyma.02G040200 1.0kb downstream 1.0kb downstream 1000 false Chr02: 3782254-3783253 Glycine max
Glyma.02G040200 2.0kb upstream 2.0kb upstream 3307 true Chr02: 3783254-3786560 Glycine max
Glyma.02G040200 2.0kb upstream 2.0kb upstream 2000 false Chr02: 3784561-3786560 Glycine max
Glyma.02G040200 2.0kb downstream 2.0kb downstream 3307 true Chr02: 3781254-3784560 Glycine max
Glyma.02G040200 2.0kb downstream 2.0kb downstream 2000 false Chr02: 3781254-3783253 Glycine max
Glyma.02G040200 5.0kb upstream 5.0kb upstream 6307 true Chr02: 3783254-3789560 Glycine max
Glyma.02G040200 5.0kb upstream 5.0kb upstream 5000 false Chr02: 3784561-3789560 Glycine max
Glyma.02G040200 5.0kb downstream 5.0kb downstream 6307 true Chr02: 3778254-3784560 Glycine max
Glyma.02G040200 5.0kb downstream 5.0kb downstream 5000 false Chr02: 3778254-3783253 Glycine max
Glyma.02G040200 10.0kb upstream 10.0kb upstream 11307 true Chr02: 3783254-3794560 Glycine max
Glyma.02G040200 10.0kb upstream 10.0kb upstream 10000 false Chr02: 3784561-3794560 Glycine max
Glyma.02G040200 10.0kb downstream 10.0kb downstream 11307 true Chr02: 3773254-3784560 Glycine max
Glyma.02G040200 10.0kb downstream 10.0kb downstream 10000 false Chr02: 3773254-3783253 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122312491 5265 Fabidae View MSA
124069623 5270 Rosid View MSA
123742553 5271 Pentapetalae View MSA
122795340 5272 Eudicot View MSA
122049491 5273 Angiosperm View MSA
121311433 5274 Embryophyte View MSA
123348729 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0632156 0.0 0.261659 Low  
cufflinks 0.245019 0.0 0.957471 Low  
cufflinks 0.0762889 0.0 0.311584 Low  
cufflinks 0.795702 0.0 2.94634   High
cufflinks 0.0178705 0.0 0.0820999 Low Low
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.186343 0.0 0.735831 Low  
cufflinks 0.0813098 0.0 0.331373 Low  
cufflinks 0.0210144 0.0 0.0950479 Low Low
cufflinks 2.761       High
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.278        
cufflinks 0.025     Low Low
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.949        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.98        
cufflinks 0.146        
cufflinks 0.802        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 1.224        
cufflinks 1.046        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.962        
cufflinks 0.018     Low Low

0 Strain