Gene : Glyma.02G038800 G. max Wm82.a2.v1
Defline:  (1 of 86) PF00005//PF00664 - ABC transporter (ABC_tran) // ABC transporter transmembrane region (ABC_membrane) Genomic Order:  388
Name:  ? Glyma.02G038800 Secondary Identifier:  ? PAC:30508431
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.02G038800 0.5kb upstream 0.5kb upstream 7963 true Chr02: 3618425-3626387 Glycine max
Glyma.02G038800 0.5kb upstream 0.5kb upstream 500 false Chr02: 3618425-3618924 Glycine max
Glyma.02G038800 0.5kb downstream 0.5kb downstream 7963 true Chr02: 3618925-3626887 Glycine max
Glyma.02G038800 0.5kb downstream 0.5kb downstream 500 false Chr02: 3626388-3626887 Glycine max
Glyma.02G038800 1.0kb upstream 1.0kb upstream 8463 true Chr02: 3617925-3626387 Glycine max
Glyma.02G038800 1.0kb upstream 1.0kb upstream 1000 false Chr02: 3617925-3618924 Glycine max
Glyma.02G038800 1.0kb downstream 1.0kb downstream 8463 true Chr02: 3618925-3627387 Glycine max
Glyma.02G038800 1.0kb downstream 1.0kb downstream 1000 false Chr02: 3626388-3627387 Glycine max
Glyma.02G038800 2.0kb upstream 2.0kb upstream 9463 true Chr02: 3616925-3626387 Glycine max
Glyma.02G038800 2.0kb upstream 2.0kb upstream 2000 false Chr02: 3616925-3618924 Glycine max
Glyma.02G038800 2.0kb downstream 2.0kb downstream 9463 true Chr02: 3618925-3628387 Glycine max
Glyma.02G038800 2.0kb downstream 2.0kb downstream 2000 false Chr02: 3626388-3628387 Glycine max
Glyma.02G038800 5.0kb upstream 5.0kb upstream 12463 true Chr02: 3613925-3626387 Glycine max
Glyma.02G038800 5.0kb upstream 5.0kb upstream 5000 false Chr02: 3613925-3618924 Glycine max
Glyma.02G038800 5.0kb downstream 5.0kb downstream 12463 true Chr02: 3618925-3631387 Glycine max
Glyma.02G038800 5.0kb downstream 5.0kb downstream 5000 false Chr02: 3626388-3631387 Glycine max
Glyma.02G038800 10.0kb upstream 10.0kb upstream 17463 true Chr02: 3608925-3626387 Glycine max
Glyma.02G038800 10.0kb upstream 10.0kb upstream 10000 false Chr02: 3608925-3618924 Glycine max
Glyma.02G038800 10.0kb downstream 10.0kb downstream 17463 true Chr02: 3618925-3636387 Glycine max
Glyma.02G038800 10.0kb downstream 10.0kb downstream 10000 false Chr02: 3626388-3636387 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122299431 5265 Fabidae View MSA
124063192 5270 Rosid View MSA
123743062 5271 Pentapetalae View MSA
122793644 5272 Eudicot View MSA
122046260 5273 Angiosperm View MSA
123429075 5275 Viridiplantae View MSA
121346944 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 10.8106 0.0 28.8497   High
cufflinks 3.41722 0.0 9.84445    
cufflinks 9.39946 0.0 25.1269   High
cufflinks 2.67174 0.0 7.93294    
cufflinks 2.04985 0.0 6.31983    
cufflinks 1.04428 0.0 3.52532   Low
cufflinks 1.70449 0.0 5.40211    
cufflinks 2.61179 0.0 7.78977    
cufflinks 1.91839 0.0 5.97405    
cufflinks 1.403        
cufflinks 0.221       Low
cufflinks 2.129        
cufflinks 0.798        
cufflinks 0.887        
cufflinks 1.239        
cufflinks 2.415        
cufflinks 0.318       Low
cufflinks 1.434        
cufflinks 2.642        
cufflinks 2.843        
cufflinks 0.217       Low
cufflinks 3.147       High
cufflinks 4.155       High
cufflinks 0.188       Low
cufflinks 3.214       High
cufflinks 0.24       Low

0 Strain