Gene : Glyma.19G001200 G. max Wm82.a2.v1
Defline:  (1 of 7) PTHR23001:SF8 - EUKARYOTIC TRANSLATION INITIATION FACTOR 5-2-RELATED Genomic Order:  12
Name:  ? Glyma.19G001200 Secondary Identifier:  ? PAC:30514553
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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.19G001200 0.5kb upstream 0.5kb upstream 2676 true Chr19: 92164-94839 Glycine max
Glyma.19G001200 0.5kb upstream 0.5kb upstream 500 false Chr19: 94340-94839 Glycine max
Glyma.19G001200 0.5kb downstream 0.5kb downstream 2676 true Chr19: 91664-94339 Glycine max
Glyma.19G001200 0.5kb downstream 0.5kb downstream 500 false Chr19: 91664-92163 Glycine max
Glyma.19G001200 1.0kb upstream 1.0kb upstream 3176 true Chr19: 92164-95339 Glycine max
Glyma.19G001200 1.0kb upstream 1.0kb upstream 1000 false Chr19: 94340-95339 Glycine max
Glyma.19G001200 1.0kb downstream 1.0kb downstream 3176 true Chr19: 91164-94339 Glycine max
Glyma.19G001200 1.0kb downstream 1.0kb downstream 1000 false Chr19: 91164-92163 Glycine max
Glyma.19G001200 2.0kb upstream 2.0kb upstream 4176 true Chr19: 92164-96339 Glycine max
Glyma.19G001200 2.0kb upstream 2.0kb upstream 2000 false Chr19: 94340-96339 Glycine max
Glyma.19G001200 2.0kb downstream 2.0kb downstream 4176 true Chr19: 90164-94339 Glycine max
Glyma.19G001200 2.0kb downstream 2.0kb downstream 2000 false Chr19: 90164-92163 Glycine max
Glyma.19G001200 5.0kb upstream 5.0kb upstream 7176 true Chr19: 92164-99339 Glycine max
Glyma.19G001200 5.0kb upstream 5.0kb upstream 5000 false Chr19: 94340-99339 Glycine max
Glyma.19G001200 5.0kb downstream 5.0kb downstream 7176 true Chr19: 87164-94339 Glycine max
Glyma.19G001200 5.0kb downstream 5.0kb downstream 5000 false Chr19: 87164-92163 Glycine max
Glyma.19G001200 10.0kb upstream 10.0kb upstream 12176 true Chr19: 92164-104339 Glycine max
Glyma.19G001200 10.0kb upstream 10.0kb upstream 10000 false Chr19: 94340-104339 Glycine max
Glyma.19G001200 10.0kb downstream 10.0kb downstream 12176 true Chr19: 82164-94339 Glycine max
Glyma.19G001200 10.0kb downstream 10.0kb downstream 10000 false Chr19: 82164-92163 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122314348 5265 Fabidae View MSA
124068400 5270 Rosid View MSA
123751041 5271 Pentapetalae View MSA
122785811 5272 Eudicot View MSA
122046544 5273 Angiosperm View MSA
121344170 5274 Embryophyte View MSA
123424683 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.431496 0.0 1.5876   Low
cufflinks 1.36538 0.0 4.57882    
cufflinks 4.28342 0.0 12.2501    
cufflinks 0.951877 0.0 3.31019    
cufflinks 8.19199 0.0 22.211   High
cufflinks 4.79724 0.0 13.5954    
cufflinks 0.20773 0.0 0.791394   Low
cufflinks 2.8169 0.0 8.51161    
cufflinks 4.10651 0.0 11.8368    
cufflinks 1.675        
cufflinks 0.934        
cufflinks 1.637        
cufflinks 12.067     High High
cufflinks 18.008     High High
cufflinks 0.644        
cufflinks 0.383        
cufflinks 1.368        
cufflinks 2.106        
cufflinks 1.699        
cufflinks 0.241       Low
cufflinks 2.158        
cufflinks 0.228       Low
cufflinks 0.235       Low
cufflinks 1.486        
cufflinks 0.206       Low
cufflinks 1.79        

0 Strain