Gene : Glyma.02G052200 G. max Wm82.a2.v1
Defline:  (1 of 1) PTHR21193:SF3 - OXIDOREDUCTASE-LIKE DOMAIN-CONTAINING PROTEIN 1 Genomic Order:  522
Name:  ? Glyma.02G052200 Secondary Identifier:  ? PAC:30506442
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.02G052200 0.5kb upstream 0.5kb upstream 1947 true Chr02: 4794974-4796920 Glycine max
Glyma.02G052200 0.5kb upstream 0.5kb upstream 500 false Chr02: 4796421-4796920 Glycine max
Glyma.02G052200 0.5kb downstream 0.5kb downstream 1947 true Chr02: 4794474-4796420 Glycine max
Glyma.02G052200 0.5kb downstream 0.5kb downstream 500 false Chr02: 4794474-4794973 Glycine max
Glyma.02G052200 1.0kb upstream 1.0kb upstream 2447 true Chr02: 4794974-4797420 Glycine max
Glyma.02G052200 1.0kb upstream 1.0kb upstream 1000 false Chr02: 4796421-4797420 Glycine max
Glyma.02G052200 1.0kb downstream 1.0kb downstream 2447 true Chr02: 4793974-4796420 Glycine max
Glyma.02G052200 1.0kb downstream 1.0kb downstream 1000 false Chr02: 4793974-4794973 Glycine max
Glyma.02G052200 2.0kb upstream 2.0kb upstream 3447 true Chr02: 4794974-4798420 Glycine max
Glyma.02G052200 2.0kb upstream 2.0kb upstream 2000 false Chr02: 4796421-4798420 Glycine max
Glyma.02G052200 2.0kb downstream 2.0kb downstream 3447 true Chr02: 4792974-4796420 Glycine max
Glyma.02G052200 2.0kb downstream 2.0kb downstream 2000 false Chr02: 4792974-4794973 Glycine max
Glyma.02G052200 5.0kb upstream 5.0kb upstream 6447 true Chr02: 4794974-4801420 Glycine max
Glyma.02G052200 5.0kb upstream 5.0kb upstream 5000 false Chr02: 4796421-4801420 Glycine max
Glyma.02G052200 5.0kb downstream 5.0kb downstream 6447 true Chr02: 4789974-4796420 Glycine max
Glyma.02G052200 5.0kb downstream 5.0kb downstream 5000 false Chr02: 4789974-4794973 Glycine max
Glyma.02G052200 10.0kb upstream 10.0kb upstream 11447 true Chr02: 4794974-4806420 Glycine max
Glyma.02G052200 10.0kb upstream 10.0kb upstream 10000 false Chr02: 4796421-4806420 Glycine max
Glyma.02G052200 10.0kb downstream 10.0kb downstream 11447 true Chr02: 4784974-4796420 Glycine max
Glyma.02G052200 10.0kb downstream 10.0kb downstream 10000 false Chr02: 4784974-4794973 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122254683 5265 Fabidae View MSA
124039019 5270 Rosid View MSA
123746716 5271 Pentapetalae View MSA
122797705 5272 Eudicot View MSA
122049661 5273 Angiosperm View MSA
121311527 5274 Embryophyte View MSA
123348812 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 11.8772 0.0 33.0709    
cufflinks 10.655 0.0 29.9803    
cufflinks 9.08801 0.0 26.116    
cufflinks 7.44287 0.0 21.8681   Low
cufflinks 12.9667 0.0 35.7458   High
cufflinks 12.038 0.0 33.3635    
cufflinks 8.02182 0.0 23.3368   Low
cufflinks 12.0068 0.0 33.4791    
cufflinks 11.785 0.0 32.8123    
cufflinks 7.535        
cufflinks 9.146     High High
cufflinks 5.798       Low
cufflinks 6.259        
cufflinks 8.774     High High
cufflinks 8.296     High High
cufflinks 5.899       Low
cufflinks 7.929     High  
cufflinks 7.251        
cufflinks 5.236       Low
cufflinks 6.461        
cufflinks 7.124     High  
cufflinks 6.253        
cufflinks 6.331        
cufflinks 7.823     High  
cufflinks 6.064        
cufflinks 7.246     High  

0 Strain