Gene : Glyma.02G058600 G. max Wm82.a2.v1
Defline:  (1 of 9) PTHR12320:SF16 - PROTEIN PHOSPHATASE 2C 80-RELATED Genomic Order:  586
Name:  ? Glyma.02G058600 Secondary Identifier:  ? PAC:30507115
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.02G058600 0.5kb upstream 0.5kb upstream 3925 true Chr02: 5249337-5253261 Glycine max
Glyma.02G058600 0.5kb upstream 0.5kb upstream 500 false Chr02: 5249337-5249836 Glycine max
Glyma.02G058600 0.5kb downstream 0.5kb downstream 3925 true Chr02: 5249837-5253761 Glycine max
Glyma.02G058600 0.5kb downstream 0.5kb downstream 500 false Chr02: 5253262-5253761 Glycine max
Glyma.02G058600 1.0kb upstream 1.0kb upstream 4425 true Chr02: 5248837-5253261 Glycine max
Glyma.02G058600 1.0kb upstream 1.0kb upstream 1000 false Chr02: 5248837-5249836 Glycine max
Glyma.02G058600 1.0kb downstream 1.0kb downstream 4425 true Chr02: 5249837-5254261 Glycine max
Glyma.02G058600 1.0kb downstream 1.0kb downstream 1000 false Chr02: 5253262-5254261 Glycine max
Glyma.02G058600 2.0kb upstream 2.0kb upstream 5425 true Chr02: 5247837-5253261 Glycine max
Glyma.02G058600 2.0kb upstream 2.0kb upstream 2000 false Chr02: 5247837-5249836 Glycine max
Glyma.02G058600 2.0kb downstream 2.0kb downstream 5425 true Chr02: 5249837-5255261 Glycine max
Glyma.02G058600 2.0kb downstream 2.0kb downstream 2000 false Chr02: 5253262-5255261 Glycine max
Glyma.02G058600 5.0kb upstream 5.0kb upstream 8425 true Chr02: 5244837-5253261 Glycine max
Glyma.02G058600 5.0kb upstream 5.0kb upstream 5000 false Chr02: 5244837-5249836 Glycine max
Glyma.02G058600 5.0kb downstream 5.0kb downstream 8425 true Chr02: 5249837-5258261 Glycine max
Glyma.02G058600 5.0kb downstream 5.0kb downstream 5000 false Chr02: 5253262-5258261 Glycine max
Glyma.02G058600 10.0kb upstream 10.0kb upstream 13425 true Chr02: 5239837-5253261 Glycine max
Glyma.02G058600 10.0kb upstream 10.0kb upstream 10000 false Chr02: 5239837-5249836 Glycine max
Glyma.02G058600 10.0kb downstream 10.0kb downstream 13425 true Chr02: 5249837-5263261 Glycine max
Glyma.02G058600 10.0kb downstream 10.0kb downstream 10000 false Chr02: 5253262-5263261 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122314824 5265 Fabidae View MSA
124074928 5270 Rosid View MSA
123743389 5271 Pentapetalae View MSA
122796886 5272 Eudicot View MSA
122043108 5273 Angiosperm View MSA
121351334 5274 Embryophyte View MSA
123428574 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.5591 0.0 14.5121   High
cufflinks 2.68368 0.0 12.0659    
cufflinks 1.22674 0.0 6.77605    
cufflinks 1.10798 0.0 4.82392    
cufflinks 1.87471 0.0 7.02265    
cufflinks 1.10917 0.0 4.86806    
cufflinks 4.94753 0.0 18.2914   High
cufflinks 1.07184 0.0 6.08196    
cufflinks 0.908273 0.0 4.04242   Low
cufflinks 0.721        
cufflinks 0.008     Low Low
cufflinks 0.516        
cufflinks 0.307        
cufflinks 0.636        
cufflinks 0.041     Low Low
cufflinks 0.687        
cufflinks 0.137        
cufflinks 0.7        
cufflinks 0.904        
cufflinks 0.54        
cufflinks 0.066        
cufflinks 0.589        
cufflinks 0.866        
cufflinks 0.073        
cufflinks 0.599        
cufflinks 0.079        

0 Strain