Gene : Glyma.02G059500 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR16201:SF43 - PQ-LOOP REPEAT FAMILY PROTEIN / TRANSMEMBRANE FAMILY PROTEIN Genomic Order:  595
Name:  ? Glyma.02G059500 Secondary Identifier:  ? PAC:30510992
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.02G059500 0.5kb upstream 0.5kb upstream 6958 true Chr02: 5356619-5363576 Glycine max
Glyma.02G059500 0.5kb upstream 0.5kb upstream 500 false Chr02: 5363077-5363576 Glycine max
Glyma.02G059500 0.5kb downstream 0.5kb downstream 6958 true Chr02: 5356119-5363076 Glycine max
Glyma.02G059500 0.5kb downstream 0.5kb downstream 500 false Chr02: 5356119-5356618 Glycine max
Glyma.02G059500 1.0kb upstream 1.0kb upstream 7458 true Chr02: 5356619-5364076 Glycine max
Glyma.02G059500 1.0kb upstream 1.0kb upstream 1000 false Chr02: 5363077-5364076 Glycine max
Glyma.02G059500 1.0kb downstream 1.0kb downstream 7458 true Chr02: 5355619-5363076 Glycine max
Glyma.02G059500 1.0kb downstream 1.0kb downstream 1000 false Chr02: 5355619-5356618 Glycine max
Glyma.02G059500 2.0kb upstream 2.0kb upstream 8458 true Chr02: 5356619-5365076 Glycine max
Glyma.02G059500 2.0kb upstream 2.0kb upstream 2000 false Chr02: 5363077-5365076 Glycine max
Glyma.02G059500 2.0kb downstream 2.0kb downstream 8458 true Chr02: 5354619-5363076 Glycine max
Glyma.02G059500 2.0kb downstream 2.0kb downstream 2000 false Chr02: 5354619-5356618 Glycine max
Glyma.02G059500 5.0kb upstream 5.0kb upstream 11458 true Chr02: 5356619-5368076 Glycine max
Glyma.02G059500 5.0kb upstream 5.0kb upstream 5000 false Chr02: 5363077-5368076 Glycine max
Glyma.02G059500 5.0kb downstream 5.0kb downstream 11458 true Chr02: 5351619-5363076 Glycine max
Glyma.02G059500 5.0kb downstream 5.0kb downstream 5000 false Chr02: 5351619-5356618 Glycine max
Glyma.02G059500 10.0kb upstream 10.0kb upstream 16458 true Chr02: 5356619-5373076 Glycine max
Glyma.02G059500 10.0kb upstream 10.0kb upstream 10000 false Chr02: 5363077-5373076 Glycine max
Glyma.02G059500 10.0kb downstream 10.0kb downstream 16458 true Chr02: 5346619-5363076 Glycine max
Glyma.02G059500 10.0kb downstream 10.0kb downstream 10000 false Chr02: 5346619-5356618 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122314760 5265 Fabidae View MSA
124069228 5270 Rosid View MSA
123744314 5271 Pentapetalae View MSA
122789645 5272 Eudicot View MSA
122043599 5273 Angiosperm View MSA
121344706 5274 Embryophyte View MSA
123427265 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 119.36 0.0 596.167 High High
cufflinks 0.774562 0.0 3.51081    
cufflinks 0.110073 0.0 0.435324 Low  
cufflinks 0.192364 0.0 0.746454    
cufflinks 0.234101 0.0 1.14581    
cufflinks 1.93203 0.0 9.49097    
cufflinks 1.80708 0.0 10.7201    
cufflinks 0.0540947 0.0 0.221792 Low Low
cufflinks 1.01625 0.0 6.9927    
cufflinks 0.004     Low Low
cufflinks 15.422     High High
cufflinks 0.036     Low Low
cufflinks 0.183        
cufflinks 0.243        
cufflinks 1.882        
cufflinks 4.485        
cufflinks 0.031     Low Low
cufflinks 0.056     Low  
cufflinks 0.026     Low Low
cufflinks 6.49        
cufflinks 6.801     High  
cufflinks 0.982        
cufflinks 1.12        
cufflinks 9.999     High High
cufflinks 8.283     High High
cufflinks 1.062        

0 Strain