Gene : Glyma.02G016100 G. max Wm82.a2.v1
Defline:  (1 of 3) PTHR31190:SF27 - ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR CRF1-RELATED Genomic Order:  161
Name:  ? Glyma.02G016100 Secondary Identifier:  ? PAC:30509453
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.02G016100 0.5kb upstream 0.5kb upstream 2086 true Chr02: 1443606-1445691 Glycine max
Glyma.02G016100 0.5kb upstream 0.5kb upstream 500 false Chr02: 1445192-1445691 Glycine max
Glyma.02G016100 0.5kb downstream 0.5kb downstream 2086 true Chr02: 1443106-1445191 Glycine max
Glyma.02G016100 0.5kb downstream 0.5kb downstream 500 false Chr02: 1443106-1443605 Glycine max
Glyma.02G016100 1.0kb upstream 1.0kb upstream 2586 true Chr02: 1443606-1446191 Glycine max
Glyma.02G016100 1.0kb upstream 1.0kb upstream 1000 false Chr02: 1445192-1446191 Glycine max
Glyma.02G016100 1.0kb downstream 1.0kb downstream 2586 true Chr02: 1442606-1445191 Glycine max
Glyma.02G016100 1.0kb downstream 1.0kb downstream 1000 false Chr02: 1442606-1443605 Glycine max
Glyma.02G016100 2.0kb upstream 2.0kb upstream 3586 true Chr02: 1443606-1447191 Glycine max
Glyma.02G016100 2.0kb upstream 2.0kb upstream 2000 false Chr02: 1445192-1447191 Glycine max
Glyma.02G016100 2.0kb downstream 2.0kb downstream 3586 true Chr02: 1441606-1445191 Glycine max
Glyma.02G016100 2.0kb downstream 2.0kb downstream 2000 false Chr02: 1441606-1443605 Glycine max
Glyma.02G016100 5.0kb upstream 5.0kb upstream 6586 true Chr02: 1443606-1450191 Glycine max
Glyma.02G016100 5.0kb upstream 5.0kb upstream 5000 false Chr02: 1445192-1450191 Glycine max
Glyma.02G016100 5.0kb downstream 5.0kb downstream 6586 true Chr02: 1438606-1445191 Glycine max
Glyma.02G016100 5.0kb downstream 5.0kb downstream 5000 false Chr02: 1438606-1443605 Glycine max
Glyma.02G016100 10.0kb upstream 10.0kb upstream 11586 true Chr02: 1443606-1455191 Glycine max
Glyma.02G016100 10.0kb upstream 10.0kb upstream 10000 false Chr02: 1445192-1455191 Glycine max
Glyma.02G016100 10.0kb downstream 10.0kb downstream 11586 true Chr02: 1433606-1445191 Glycine max
Glyma.02G016100 10.0kb downstream 10.0kb downstream 10000 false Chr02: 1433606-1443605 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122304370 5265 Fabidae View MSA
124073164 5270 Rosid View MSA
123751106 5271 Pentapetalae View MSA
122797584 5272 Eudicot View MSA
122050930 5273 Angiosperm View MSA
123428898 5275 Viridiplantae View MSA
121351000 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 23.825 0.0 63.5797 High High
cufflinks 0.451307 0.0 1.69509   Low
cufflinks 2.86301 0.0 9.29153    
cufflinks 2.89044 0.0 9.30947    
cufflinks 17.5205 0.0 46.8385    
cufflinks 5.18541 0.0 15.3587    
cufflinks 2.1676 0.0 7.23347    
cufflinks 4.77867 0.0 14.3275    
cufflinks 20.5233 0.0 54.7691 High High
cufflinks 82.454     High  
cufflinks 321.441     High High
cufflinks 14.903     High  
cufflinks 11.378     High  
cufflinks 7.933     High  
cufflinks 374.85     High High
cufflinks 7.649     High  
cufflinks 493.663     High High
cufflinks 15.558     High  
cufflinks 0.366       Low
cufflinks 3.256        
cufflinks 404.775     High High
cufflinks 2.41       Low
cufflinks 3.646        
cufflinks 204.106     High  
cufflinks 2.994        
cufflinks 470.554     High High

0 Strain