Gene : Glyma.18G300400 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR11654//PTHR11654:SF146 - OLIGOPEPTIDE TRANSPORTER-RELATED Genomic Order:  3004
Name:  ? Glyma.18G300400 Secondary Identifier:  ? PAC:30556802
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.18G300400 0.5kb upstream 0.5kb upstream 3272 true Chr18: 57831381-57834652 Glycine max
Glyma.18G300400 0.5kb upstream 0.5kb upstream 500 false Chr18: 57834153-57834652 Glycine max
Glyma.18G300400 0.5kb downstream 0.5kb downstream 3272 true Chr18: 57830881-57834152 Glycine max
Glyma.18G300400 0.5kb downstream 0.5kb downstream 500 false Chr18: 57830881-57831380 Glycine max
Glyma.18G300400 1.0kb upstream 1.0kb upstream 3772 true Chr18: 57831381-57835152 Glycine max
Glyma.18G300400 1.0kb upstream 1.0kb upstream 1000 false Chr18: 57834153-57835152 Glycine max
Glyma.18G300400 1.0kb downstream 1.0kb downstream 3772 true Chr18: 57830381-57834152 Glycine max
Glyma.18G300400 1.0kb downstream 1.0kb downstream 1000 false Chr18: 57830381-57831380 Glycine max
Glyma.18G300400 2.0kb upstream 2.0kb upstream 4772 true Chr18: 57831381-57836152 Glycine max
Glyma.18G300400 2.0kb upstream 2.0kb upstream 2000 false Chr18: 57834153-57836152 Glycine max
Glyma.18G300400 2.0kb downstream 2.0kb downstream 4772 true Chr18: 57829381-57834152 Glycine max
Glyma.18G300400 2.0kb downstream 2.0kb downstream 2000 false Chr18: 57829381-57831380 Glycine max
Glyma.18G300400 5.0kb upstream 5.0kb upstream 7772 true Chr18: 57831381-57839152 Glycine max
Glyma.18G300400 5.0kb upstream 5.0kb upstream 5000 false Chr18: 57834153-57839152 Glycine max
Glyma.18G300400 5.0kb downstream 5.0kb downstream 7772 true Chr18: 57826381-57834152 Glycine max
Glyma.18G300400 5.0kb downstream 5.0kb downstream 5000 false Chr18: 57826381-57831380 Glycine max
Glyma.18G300400 10.0kb upstream 10.0kb upstream 12772 true Chr18: 57831381-57844152 Glycine max
Glyma.18G300400 10.0kb upstream 10.0kb upstream 10000 false Chr18: 57834153-57844152 Glycine max
Glyma.18G300400 10.0kb downstream 10.0kb downstream 12772 true Chr18: 57821381-57834152 Glycine max
Glyma.18G300400 10.0kb downstream 10.0kb downstream 10000 false Chr18: 57821381-57831380 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122312212 5265 Fabidae View MSA
124066673 5270 Rosid View MSA
123753488 5271 Pentapetalae View MSA
122795216 5272 Eudicot View MSA
122048463 5273 Angiosperm View MSA
121351774 5274 Embryophyte View MSA
123382317 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0208092 0.0 0.0886781 Low  
cufflinks 0.274528 0.0 1.03602   High
cufflinks 0.134261 0.0 0.521928 Low  
cufflinks 0.00561921 0.0 0.0270173 Low Low
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0190942 0.0 0.0818286 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0205796 0.0 0.0877554 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.006     Low  
cufflinks 0.021     Low  
cufflinks 1.796       High
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 8.102     High High
cufflinks 0.334        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.007     Low  
cufflinks 0.007     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed

0 Strain