Gene : Glyma.02G267300 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR23163:SF0 - E3 UBIQUITIN-PROTEIN LIGASE BRE1 Genomic Order:  2673
Name:  ? Glyma.02G267300 Secondary Identifier:  ? PAC:30506398
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Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax PWY-7511 Glycine max pathologic  

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.02G267300 0.5kb upstream 0.5kb upstream 10337 true Chr02: 45160565-45170901 Glycine max
Glyma.02G267300 0.5kb upstream 0.5kb upstream 500 false Chr02: 45170402-45170901 Glycine max
Glyma.02G267300 0.5kb downstream 0.5kb downstream 10337 true Chr02: 45160065-45170401 Glycine max
Glyma.02G267300 0.5kb downstream 0.5kb downstream 500 false Chr02: 45160065-45160564 Glycine max
Glyma.02G267300 1.0kb upstream 1.0kb upstream 10837 true Chr02: 45160565-45171401 Glycine max
Glyma.02G267300 1.0kb upstream 1.0kb upstream 1000 false Chr02: 45170402-45171401 Glycine max
Glyma.02G267300 1.0kb downstream 1.0kb downstream 10837 true Chr02: 45159565-45170401 Glycine max
Glyma.02G267300 1.0kb downstream 1.0kb downstream 1000 false Chr02: 45159565-45160564 Glycine max
Glyma.02G267300 2.0kb upstream 2.0kb upstream 11837 true Chr02: 45160565-45172401 Glycine max
Glyma.02G267300 2.0kb upstream 2.0kb upstream 2000 false Chr02: 45170402-45172401 Glycine max
Glyma.02G267300 2.0kb downstream 2.0kb downstream 11837 true Chr02: 45158565-45170401 Glycine max
Glyma.02G267300 2.0kb downstream 2.0kb downstream 2000 false Chr02: 45158565-45160564 Glycine max
Glyma.02G267300 5.0kb upstream 5.0kb upstream 14837 true Chr02: 45160565-45175401 Glycine max
Glyma.02G267300 5.0kb upstream 5.0kb upstream 5000 false Chr02: 45170402-45175401 Glycine max
Glyma.02G267300 5.0kb downstream 5.0kb downstream 14837 true Chr02: 45155565-45170401 Glycine max
Glyma.02G267300 5.0kb downstream 5.0kb downstream 5000 false Chr02: 45155565-45160564 Glycine max
Glyma.02G267300 10.0kb upstream 10.0kb upstream 19837 true Chr02: 45160565-45180401 Glycine max
Glyma.02G267300 10.0kb upstream 10.0kb upstream 10000 false Chr02: 45170402-45180401 Glycine max
Glyma.02G267300 10.0kb downstream 10.0kb downstream 19837 true Chr02: 45150565-45170401 Glycine max
Glyma.02G267300 10.0kb downstream 10.0kb downstream 10000 false Chr02: 45150565-45160564 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122307640 5265 Fabidae View MSA
124068574 5270 Rosid View MSA
123753299 5271 Pentapetalae View MSA
122793673 5272 Eudicot View MSA
122042098 5273 Angiosperm View MSA
121349326 5274 Embryophyte View MSA
123423997 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.55023 0.0 19.5986    
cufflinks 4.83612 0.0 23.2095    
cufflinks 7.21136 0.0 33.1289   High
cufflinks 4.05839 0.0 24.8299    
cufflinks 2.05688 0.0 11.6207   Low
cufflinks 2.32765 0.0 9.69313   Low
cufflinks 3.56326 0.0 22.4778    
cufflinks 3.62326 0.0 17.6411    
cufflinks 2.9071 0.0 17.2496    
cufflinks 0.25        
cufflinks 0.106       Low
cufflinks 0.441       High
cufflinks 0.165        
cufflinks 0.137        
cufflinks 0.166        
cufflinks 0.265        
cufflinks 0.143        
cufflinks 0.428       High
cufflinks 0.466       High
cufflinks 0.255        
cufflinks 0.122       Low
cufflinks 0.278        
cufflinks 0.303        
cufflinks 0.128       Low
cufflinks 0.28        
cufflinks 0.167        

0 Strain