Gene : Glyma.02G258300 G. max Wm82.a2.v1
Defline:  (1 of 6) PTHR12565//PTHR12565:SF181 - STEROL REGULATORY ELEMENT-BINDING PROTEIN Genomic Order:  2583
Name:  ? Glyma.02G258300 Secondary Identifier:  ? PAC:30510484
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.02G258300 0.5kb upstream 0.5kb upstream 2459 true Chr02: 44532315-44534773 Glycine max
Glyma.02G258300 0.5kb upstream 0.5kb upstream 500 false Chr02: 44532315-44532814 Glycine max
Glyma.02G258300 0.5kb downstream 0.5kb downstream 2459 true Chr02: 44532815-44535273 Glycine max
Glyma.02G258300 0.5kb downstream 0.5kb downstream 500 false Chr02: 44534774-44535273 Glycine max
Glyma.02G258300 1.0kb upstream 1.0kb upstream 2959 true Chr02: 44531815-44534773 Glycine max
Glyma.02G258300 1.0kb upstream 1.0kb upstream 1000 false Chr02: 44531815-44532814 Glycine max
Glyma.02G258300 1.0kb downstream 1.0kb downstream 2959 true Chr02: 44532815-44535773 Glycine max
Glyma.02G258300 1.0kb downstream 1.0kb downstream 1000 false Chr02: 44534774-44535773 Glycine max
Glyma.02G258300 2.0kb upstream 2.0kb upstream 3959 true Chr02: 44530815-44534773 Glycine max
Glyma.02G258300 2.0kb upstream 2.0kb upstream 2000 false Chr02: 44530815-44532814 Glycine max
Glyma.02G258300 2.0kb downstream 2.0kb downstream 3959 true Chr02: 44532815-44536773 Glycine max
Glyma.02G258300 2.0kb downstream 2.0kb downstream 2000 false Chr02: 44534774-44536773 Glycine max
Glyma.02G258300 5.0kb upstream 5.0kb upstream 6959 true Chr02: 44527815-44534773 Glycine max
Glyma.02G258300 5.0kb upstream 5.0kb upstream 5000 false Chr02: 44527815-44532814 Glycine max
Glyma.02G258300 5.0kb downstream 5.0kb downstream 6959 true Chr02: 44532815-44539773 Glycine max
Glyma.02G258300 5.0kb downstream 5.0kb downstream 5000 false Chr02: 44534774-44539773 Glycine max
Glyma.02G258300 10.0kb upstream 10.0kb upstream 11959 true Chr02: 44522815-44534773 Glycine max
Glyma.02G258300 10.0kb upstream 10.0kb upstream 10000 false Chr02: 44522815-44532814 Glycine max
Glyma.02G258300 10.0kb downstream 10.0kb downstream 11959 true Chr02: 44532815-44544773 Glycine max
Glyma.02G258300 10.0kb downstream 10.0kb downstream 10000 false Chr02: 44534774-44544773 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122254606 5265 Fabidae View MSA
124063256 5270 Rosid View MSA
123736392 5271 Pentapetalae View MSA
122786016 5272 Eudicot View MSA
122048947 5273 Angiosperm View MSA
121351451 5274 Embryophyte View MSA
123428440 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.356281 0.0 1.36687    
cufflinks 4.79888 0.0 14.8765   High
cufflinks 2.66312 0.0 8.92332    
cufflinks 0.281331 0.0 1.08911    
cufflinks 0.612695 0.0 2.29515    
cufflinks 0.369923 0.0 1.4171    
cufflinks 0.03458 0.0 0.148933 Low Low
cufflinks 15.1043 0.0 41.0309   High
cufflinks 0.794766 0.0 2.93614    
cufflinks 1.663       High
cufflinks 0.041     Low Low
cufflinks 1.318        
cufflinks 0.009     Low Low
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.027     Low Low
cufflinks 0.887        
cufflinks 0.077        
cufflinks 0.898        
cufflinks 3.165       High
cufflinks 0.588        
cufflinks 0.213        
cufflinks 0.696        
cufflinks 0.185        
cufflinks 0.086        
cufflinks 1.063        
cufflinks 0.11        

0 Strain