Gene : Glyma.18G296100 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR13952:SF6 - U11/U12 SMALL NUCLEAR RIBONUCLEOPROTEIN 35 KDA PROTEIN Genomic Order:  2961
Name:  ? Glyma.18G296100 Secondary Identifier:  ? PAC:30554346
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.18G296100 0.5kb upstream 0.5kb upstream 4756 true Chr18: 57314163-57318918 Glycine max
Glyma.18G296100 0.5kb upstream 0.5kb upstream 500 false Chr18: 57314163-57314662 Glycine max
Glyma.18G296100 0.5kb downstream 0.5kb downstream 4756 true Chr18: 57314663-57319418 Glycine max
Glyma.18G296100 0.5kb downstream 0.5kb downstream 500 false Chr18: 57318919-57319418 Glycine max
Glyma.18G296100 1.0kb upstream 1.0kb upstream 5256 true Chr18: 57313663-57318918 Glycine max
Glyma.18G296100 1.0kb upstream 1.0kb upstream 1000 false Chr18: 57313663-57314662 Glycine max
Glyma.18G296100 1.0kb downstream 1.0kb downstream 5256 true Chr18: 57314663-57319918 Glycine max
Glyma.18G296100 1.0kb downstream 1.0kb downstream 1000 false Chr18: 57318919-57319918 Glycine max
Glyma.18G296100 2.0kb upstream 2.0kb upstream 6256 true Chr18: 57312663-57318918 Glycine max
Glyma.18G296100 2.0kb upstream 2.0kb upstream 2000 false Chr18: 57312663-57314662 Glycine max
Glyma.18G296100 2.0kb downstream 2.0kb downstream 6256 true Chr18: 57314663-57320918 Glycine max
Glyma.18G296100 2.0kb downstream 2.0kb downstream 2000 false Chr18: 57318919-57320918 Glycine max
Glyma.18G296100 5.0kb upstream 5.0kb upstream 9256 true Chr18: 57309663-57318918 Glycine max
Glyma.18G296100 5.0kb upstream 5.0kb upstream 5000 false Chr18: 57309663-57314662 Glycine max
Glyma.18G296100 5.0kb downstream 5.0kb downstream 9256 true Chr18: 57314663-57323918 Glycine max
Glyma.18G296100 5.0kb downstream 5.0kb downstream 5000 false Chr18: 57318919-57323918 Glycine max
Glyma.18G296100 10.0kb upstream 10.0kb upstream 14256 true Chr18: 57304663-57318918 Glycine max
Glyma.18G296100 10.0kb upstream 10.0kb upstream 10000 false Chr18: 57304663-57314662 Glycine max
Glyma.18G296100 10.0kb downstream 10.0kb downstream 14256 true Chr18: 57314663-57328918 Glycine max
Glyma.18G296100 10.0kb downstream 10.0kb downstream 10000 false Chr18: 57318919-57328918 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122303279 5265 Fabidae View MSA
124062373 5270 Rosid View MSA
123739426 5271 Pentapetalae View MSA
122792874 5272 Eudicot View MSA
122049449 5273 Angiosperm View MSA
123429142 5275 Viridiplantae View MSA
121351469 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.40596 0.0 10.3695    
cufflinks 3.82301 0.0 11.4661    
cufflinks 3.12604 0.0 9.61795    
cufflinks 4.57669 0.0 13.3801   High
cufflinks 2.76412 0.0 8.67923   Low
cufflinks 3.10547 0.0 9.59575    
cufflinks 2.94688 0.0 9.18701    
cufflinks 4.07291 0.0 12.0848   High
cufflinks 3.16557 0.0 9.74639    
cufflinks 1.229        
cufflinks 0.261       Low
cufflinks 1.561       High
cufflinks 1.067        
cufflinks 1.208        
cufflinks 0.932        
cufflinks 1.169        
cufflinks 0.414       Low
cufflinks 1.593       High
cufflinks 1.651       High
cufflinks 1.164        
cufflinks 0.463       Low
cufflinks 1.252        
cufflinks 1.147        
cufflinks 0.537        
cufflinks 1.043        
cufflinks 0.573        

0 Strain