Gene : Glyma.02G296400 G. max Wm82.a2.v1
Defline:  (1 of 8) PTHR23344:SF8 - GLYCEROPHOSPHODIESTER PHOSPHODIESTERASE-LIKE PROTEIN-RELATED Genomic Order:  2964
Name:  ? Glyma.02G296400 Secondary Identifier:  ? PAC:30507109
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax PWY-7409 Glycine max pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.02G296400 0.5kb upstream 0.5kb upstream 7538 true Chr02: 47417471-47425008 Glycine max
Glyma.02G296400 0.5kb upstream 0.5kb upstream 500 false Chr02: 47417471-47417970 Glycine max
Glyma.02G296400 0.5kb downstream 0.5kb downstream 7538 true Chr02: 47417971-47425508 Glycine max
Glyma.02G296400 0.5kb downstream 0.5kb downstream 500 false Chr02: 47425009-47425508 Glycine max
Glyma.02G296400 1.0kb upstream 1.0kb upstream 8038 true Chr02: 47416971-47425008 Glycine max
Glyma.02G296400 1.0kb upstream 1.0kb upstream 1000 false Chr02: 47416971-47417970 Glycine max
Glyma.02G296400 1.0kb downstream 1.0kb downstream 8038 true Chr02: 47417971-47426008 Glycine max
Glyma.02G296400 1.0kb downstream 1.0kb downstream 1000 false Chr02: 47425009-47426008 Glycine max
Glyma.02G296400 2.0kb upstream 2.0kb upstream 9038 true Chr02: 47415971-47425008 Glycine max
Glyma.02G296400 2.0kb upstream 2.0kb upstream 2000 false Chr02: 47415971-47417970 Glycine max
Glyma.02G296400 2.0kb downstream 2.0kb downstream 9038 true Chr02: 47417971-47427008 Glycine max
Glyma.02G296400 2.0kb downstream 2.0kb downstream 2000 false Chr02: 47425009-47427008 Glycine max
Glyma.02G296400 5.0kb upstream 5.0kb upstream 12038 true Chr02: 47412971-47425008 Glycine max
Glyma.02G296400 5.0kb upstream 5.0kb upstream 5000 false Chr02: 47412971-47417970 Glycine max
Glyma.02G296400 5.0kb downstream 5.0kb downstream 12038 true Chr02: 47417971-47430008 Glycine max
Glyma.02G296400 5.0kb downstream 5.0kb downstream 5000 false Chr02: 47425009-47430008 Glycine max
Glyma.02G296400 10.0kb upstream 10.0kb upstream 17038 true Chr02: 47407971-47425008 Glycine max
Glyma.02G296400 10.0kb upstream 10.0kb upstream 10000 false Chr02: 47407971-47417970 Glycine max
Glyma.02G296400 10.0kb downstream 10.0kb downstream 17038 true Chr02: 47417971-47435008 Glycine max
Glyma.02G296400 10.0kb downstream 10.0kb downstream 10000 false Chr02: 47425009-47435008 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122303493 5265 Fabidae View MSA
124064633 5270 Rosid View MSA
123747170 5271 Pentapetalae View MSA
122796977 5272 Eudicot View MSA
122046858 5273 Angiosperm View MSA
121349950 5274 Embryophyte View MSA
123381513 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 30.7179 0.0 86.1836 High  
cufflinks 23.7911 0.0 65.2765 High  
cufflinks 18.4107 0.0 49.7218    
cufflinks 26.0256 0.0 71.9696 High  
cufflinks 32.3982 0.0 91.3804 High  
cufflinks 123.973 0.0 447.269 High High
cufflinks 16.9686 0.0 45.57    
cufflinks 23.6657 0.0 64.9435 High  
cufflinks 20.4967 0.0 55.6541 High  
cufflinks 23.032     High High
cufflinks 5.061       Low
cufflinks 9.114     High  
cufflinks 20.356     High  
cufflinks 14.336     High  
cufflinks 2.422       Low
cufflinks 17.319     High  
cufflinks 23.977     High High
cufflinks 13.176     High  
cufflinks 10.931     High  
cufflinks 13.163     High  
cufflinks 4.484       Low
cufflinks 14.592     High  
cufflinks 15.089     High  
cufflinks 3.62       Low
cufflinks 12.654     High  
cufflinks 12.478     High  

0 Strain