Gene : Glyma.02G308500 G. max Wm82.a2.v1
Defline:  (1 of 4) 2.3.1.9 - Acetyl-CoA C-acetyltransferase / Acetoacetyl-CoA thiolase Genomic Order:  3085
Name:  ? Glyma.02G308500 Secondary Identifier:  ? PAC:30509359
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Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax ILEUDEG-PWY Glycine max pathologic  
Gmax PWY-5910 Glycine max pathologic  
Gmax PWY-922 Glycine max pathologic  

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.02G308500 0.5kb upstream 0.5kb upstream 4338 true Chr02: 48224472-48228809 Glycine max
Glyma.02G308500 0.5kb upstream 0.5kb upstream 500 false Chr02: 48228310-48228809 Glycine max
Glyma.02G308500 0.5kb downstream 0.5kb downstream 4338 true Chr02: 48223972-48228309 Glycine max
Glyma.02G308500 0.5kb downstream 0.5kb downstream 500 false Chr02: 48223972-48224471 Glycine max
Glyma.02G308500 1.0kb upstream 1.0kb upstream 4838 true Chr02: 48224472-48229309 Glycine max
Glyma.02G308500 1.0kb upstream 1.0kb upstream 1000 false Chr02: 48228310-48229309 Glycine max
Glyma.02G308500 1.0kb downstream 1.0kb downstream 4838 true Chr02: 48223472-48228309 Glycine max
Glyma.02G308500 1.0kb downstream 1.0kb downstream 1000 false Chr02: 48223472-48224471 Glycine max
Glyma.02G308500 2.0kb upstream 2.0kb upstream 5838 true Chr02: 48224472-48230309 Glycine max
Glyma.02G308500 2.0kb upstream 2.0kb upstream 2000 false Chr02: 48228310-48230309 Glycine max
Glyma.02G308500 2.0kb downstream 2.0kb downstream 5838 true Chr02: 48222472-48228309 Glycine max
Glyma.02G308500 2.0kb downstream 2.0kb downstream 2000 false Chr02: 48222472-48224471 Glycine max
Glyma.02G308500 5.0kb upstream 5.0kb upstream 8838 true Chr02: 48224472-48233309 Glycine max
Glyma.02G308500 5.0kb upstream 5.0kb upstream 5000 false Chr02: 48228310-48233309 Glycine max
Glyma.02G308500 5.0kb downstream 5.0kb downstream 8838 true Chr02: 48219472-48228309 Glycine max
Glyma.02G308500 5.0kb downstream 5.0kb downstream 5000 false Chr02: 48219472-48224471 Glycine max
Glyma.02G308500 10.0kb upstream 10.0kb upstream 13838 true Chr02: 48224472-48238309 Glycine max
Glyma.02G308500 10.0kb upstream 10.0kb upstream 10000 false Chr02: 48228310-48238309 Glycine max
Glyma.02G308500 10.0kb downstream 10.0kb downstream 13838 true Chr02: 48214472-48228309 Glycine max
Glyma.02G308500 10.0kb downstream 10.0kb downstream 10000 false Chr02: 48214472-48224471 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122301203 5265 Fabidae View MSA
124066506 5270 Rosid View MSA
123747270 5271 Pentapetalae View MSA
122788364 5272 Eudicot View MSA
122045789 5273 Angiosperm View MSA
121344005 5274 Embryophyte View MSA
123427573 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 9.49552 0.0 33.9028    
cufflinks 9.88139 0.0 35.6362    
cufflinks 6.87976 0.0 25.8266   Low
cufflinks 10.4346 0.0 37.8732    
cufflinks 10.5235 0.0 37.0867    
cufflinks 9.03486 0.0 28.0045    
cufflinks 8.41975 0.0 26.4846    
cufflinks 11.6664 0.0 35.2186   High
cufflinks 6.35091 0.0 24.2644   Low
cufflinks 3.437        
cufflinks 2.662        
cufflinks 2.432        
cufflinks 4.969       High
cufflinks 6.887     High High
cufflinks 3.562        
cufflinks 2.66        
cufflinks 2.302        
cufflinks 3.166        
cufflinks 4.509       High
cufflinks 2.09       Low
cufflinks 2.969        
cufflinks 2.441        
cufflinks 3.697        
cufflinks 3.126        
cufflinks 2.241       Low
cufflinks 2.37        

0 Strain