Gene : Glyma.02G307700 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR32077:SF3 - FASCICLIN-LIKE ARABINOGALACTAN PROTEIN 7 Genomic Order:  3077
Name:  ? Glyma.02G307700 Secondary Identifier:  ? PAC:30508528
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.02G307700 0.5kb upstream 0.5kb upstream 2781 true Chr02: 48186315-48189095 Glycine max
Glyma.02G307700 0.5kb upstream 0.5kb upstream 500 false Chr02: 48186315-48186814 Glycine max
Glyma.02G307700 0.5kb downstream 0.5kb downstream 2781 true Chr02: 48186815-48189595 Glycine max
Glyma.02G307700 0.5kb downstream 0.5kb downstream 500 false Chr02: 48189096-48189595 Glycine max
Glyma.02G307700 1.0kb upstream 1.0kb upstream 3281 true Chr02: 48185815-48189095 Glycine max
Glyma.02G307700 1.0kb upstream 1.0kb upstream 1000 false Chr02: 48185815-48186814 Glycine max
Glyma.02G307700 1.0kb downstream 1.0kb downstream 3281 true Chr02: 48186815-48190095 Glycine max
Glyma.02G307700 1.0kb downstream 1.0kb downstream 1000 false Chr02: 48189096-48190095 Glycine max
Glyma.02G307700 2.0kb upstream 2.0kb upstream 4281 true Chr02: 48184815-48189095 Glycine max
Glyma.02G307700 2.0kb upstream 2.0kb upstream 2000 false Chr02: 48184815-48186814 Glycine max
Glyma.02G307700 2.0kb downstream 2.0kb downstream 4281 true Chr02: 48186815-48191095 Glycine max
Glyma.02G307700 2.0kb downstream 2.0kb downstream 2000 false Chr02: 48189096-48191095 Glycine max
Glyma.02G307700 5.0kb upstream 5.0kb upstream 7281 true Chr02: 48181815-48189095 Glycine max
Glyma.02G307700 5.0kb upstream 5.0kb upstream 5000 false Chr02: 48181815-48186814 Glycine max
Glyma.02G307700 5.0kb downstream 5.0kb downstream 7281 true Chr02: 48186815-48194095 Glycine max
Glyma.02G307700 5.0kb downstream 5.0kb downstream 5000 false Chr02: 48189096-48194095 Glycine max
Glyma.02G307700 10.0kb upstream 10.0kb upstream 12281 true Chr02: 48176815-48189095 Glycine max
Glyma.02G307700 10.0kb upstream 10.0kb upstream 10000 false Chr02: 48176815-48186814 Glycine max
Glyma.02G307700 10.0kb downstream 10.0kb downstream 12281 true Chr02: 48186815-48199095 Glycine max
Glyma.02G307700 10.0kb downstream 10.0kb downstream 10000 false Chr02: 48189096-48199095 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122299041 5265 Fabidae View MSA
124061548 5270 Rosid View MSA
123744352 5271 Pentapetalae View MSA
122795862 5272 Eudicot View MSA
122048693 5273 Angiosperm View MSA
121351509 5274 Embryophyte View MSA
123426561 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 7.96219 0.0 28.5378   Low
cufflinks 151.919 0.0 490.201 High  
cufflinks 22.036 0.0 66.3534 High Low
cufflinks 141.428 0.0 443.701 High  
cufflinks 127.625 0.0 384.766 High  
cufflinks 171.193 0.0 576.499 High  
cufflinks 211.114 0.0 776.23 High  
cufflinks 91.8339 0.0 322.643 High  
cufflinks 74.0212 0.0 246.727 High  
cufflinks 106.411     High High
cufflinks 4.682       Low
cufflinks 14.073     High  
cufflinks 76.879     High High
cufflinks 102.103     High High
cufflinks 11.241     High  
cufflinks 41.819     High  
cufflinks 17.896     High  
cufflinks 46.133     High  
cufflinks 75.396     High High
cufflinks 22.145     High  
cufflinks 7.483     High Low
cufflinks 22.616     High  
cufflinks 29.984     High  
cufflinks 2.988       Low
cufflinks 23.217     High  
cufflinks 16.287     High  

0 Strain