Gene : Glyma.02G003300 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR11780 - NADH-UBIQUINONE OXIDOREDUCTASE FLAVOPROTEIN 1 NDUFV1 Genomic Order:  33
Name:  ? Glyma.02G003300 Secondary Identifier:  ? PAC:30509362
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax PWY-3781 Glycine max pathologic  
Gmax PWY-4302 Glycine max pathologic  
Gmax PWY-5083 Glycine max pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.02G003300 0.5kb upstream 0.5kb upstream 5712 true Chr02: 379246-384957 Glycine max
Glyma.02G003300 0.5kb upstream 0.5kb upstream 500 false Chr02: 379246-379745 Glycine max
Glyma.02G003300 0.5kb downstream 0.5kb downstream 5712 true Chr02: 379746-385457 Glycine max
Glyma.02G003300 0.5kb downstream 0.5kb downstream 500 false Chr02: 384958-385457 Glycine max
Glyma.02G003300 1.0kb upstream 1.0kb upstream 6212 true Chr02: 378746-384957 Glycine max
Glyma.02G003300 1.0kb upstream 1.0kb upstream 1000 false Chr02: 378746-379745 Glycine max
Glyma.02G003300 1.0kb downstream 1.0kb downstream 6212 true Chr02: 379746-385957 Glycine max
Glyma.02G003300 1.0kb downstream 1.0kb downstream 1000 false Chr02: 384958-385957 Glycine max
Glyma.02G003300 2.0kb upstream 2.0kb upstream 7212 true Chr02: 377746-384957 Glycine max
Glyma.02G003300 2.0kb upstream 2.0kb upstream 2000 false Chr02: 377746-379745 Glycine max
Glyma.02G003300 2.0kb downstream 2.0kb downstream 7212 true Chr02: 379746-386957 Glycine max
Glyma.02G003300 2.0kb downstream 2.0kb downstream 2000 false Chr02: 384958-386957 Glycine max
Glyma.02G003300 5.0kb upstream 5.0kb upstream 10212 true Chr02: 374746-384957 Glycine max
Glyma.02G003300 5.0kb upstream 5.0kb upstream 5000 false Chr02: 374746-379745 Glycine max
Glyma.02G003300 5.0kb downstream 5.0kb downstream 10212 true Chr02: 379746-389957 Glycine max
Glyma.02G003300 5.0kb downstream 5.0kb downstream 5000 false Chr02: 384958-389957 Glycine max
Glyma.02G003300 10.0kb upstream 10.0kb upstream 15212 true Chr02: 369746-384957 Glycine max
Glyma.02G003300 10.0kb upstream 10.0kb upstream 10000 false Chr02: 369746-379745 Glycine max
Glyma.02G003300 10.0kb downstream 10.0kb downstream 15212 true Chr02: 379746-394957 Glycine max
Glyma.02G003300 10.0kb downstream 10.0kb downstream 10000 false Chr02: 384958-394957 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122301646 5265 Fabidae View MSA
124064570 5270 Rosid View MSA
123748716 5271 Pentapetalae View MSA
122786089 5272 Eudicot View MSA
122048540 5273 Angiosperm View MSA
121346586 5274 Embryophyte View MSA
123424028 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 31.2681 0.0 86.6809 High  
cufflinks 45.1952 0.0 130.479 High  
cufflinks 26.7597 0.0 73.3698 High Low
cufflinks 38.9514 0.0 110.594 High  
cufflinks 53.2088 0.0 157.277 High  
cufflinks 72.2363 0.0 224.651 High High
cufflinks 35.1783 0.0 98.8178 High  
cufflinks 36.0696 0.0 101.478 High  
cufflinks 45.7919 0.0 132.62 High  
cufflinks 23.937     High  
cufflinks 12.272     High Low
cufflinks 18.581     High  
cufflinks 35.075     High High
cufflinks 33.726     High High
cufflinks 13.899     High Low
cufflinks 20.702     High  
cufflinks 12.683     High Low
cufflinks 24.365     High  
cufflinks 26.799     High  
cufflinks 19.118     High  
cufflinks 14.322     High Low
cufflinks 20.476     High  
cufflinks 20.325     High  
cufflinks 14.984     High  
cufflinks 20.034     High  
cufflinks 19.831     High  

0 Strain