Gene : Glyma.02G001500 G. max Wm82.a2.v1
Defline:  (1 of 10) 2.3.1.119//2.3.1.199 - Very-long-chain 3-oxoacyl-CoA synthase / Very-long-chain beta-ketoacyl-CoA synthase Genomic Order:  15
Name:  ? Glyma.02G001500 Secondary Identifier:  ? PAC:30510558
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Sequence Feature Displayer

Ontology Annotation Displayer

7 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax PWY-5080 Glycine max pathologic  
Gmax PWY-6433 Glycine max pathologic  
Gmax PWY-6598 Glycine max pathologic  
Gmax PWY-7036 Glycine max pathologic  
Gmax PWY-7601 Glycine max pathologic  
Gmax PWY-7606 Glycine max pathologic  
Gmax PWY-7619 Glycine max pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

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Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.02G001500 0.5kb upstream 0.5kb upstream 3795 true Chr02: 174810-178604 Glycine max
Glyma.02G001500 0.5kb upstream 0.5kb upstream 500 false Chr02: 174810-175309 Glycine max
Glyma.02G001500 0.5kb downstream 0.5kb downstream 3795 true Chr02: 175310-179104 Glycine max
Glyma.02G001500 0.5kb downstream 0.5kb downstream 500 false Chr02: 178605-179104 Glycine max
Glyma.02G001500 1.0kb upstream 1.0kb upstream 4295 true Chr02: 174310-178604 Glycine max
Glyma.02G001500 1.0kb upstream 1.0kb upstream 1000 false Chr02: 174310-175309 Glycine max
Glyma.02G001500 1.0kb downstream 1.0kb downstream 4295 true Chr02: 175310-179604 Glycine max
Glyma.02G001500 1.0kb downstream 1.0kb downstream 1000 false Chr02: 178605-179604 Glycine max
Glyma.02G001500 2.0kb upstream 2.0kb upstream 5295 true Chr02: 173310-178604 Glycine max
Glyma.02G001500 2.0kb upstream 2.0kb upstream 2000 false Chr02: 173310-175309 Glycine max
Glyma.02G001500 2.0kb downstream 2.0kb downstream 5295 true Chr02: 175310-180604 Glycine max
Glyma.02G001500 2.0kb downstream 2.0kb downstream 2000 false Chr02: 178605-180604 Glycine max
Glyma.02G001500 5.0kb upstream 5.0kb upstream 8295 true Chr02: 170310-178604 Glycine max
Glyma.02G001500 5.0kb upstream 5.0kb upstream 5000 false Chr02: 170310-175309 Glycine max
Glyma.02G001500 5.0kb downstream 5.0kb downstream 8295 true Chr02: 175310-183604 Glycine max
Glyma.02G001500 5.0kb downstream 5.0kb downstream 5000 false Chr02: 178605-183604 Glycine max
Glyma.02G001500 10.0kb upstream 10.0kb upstream 13295 true Chr02: 165310-178604 Glycine max
Glyma.02G001500 10.0kb upstream 10.0kb upstream 10000 false Chr02: 165310-175309 Glycine max
Glyma.02G001500 10.0kb downstream 10.0kb downstream 13295 true Chr02: 175310-188604 Glycine max
Glyma.02G001500 10.0kb downstream 10.0kb downstream 10000 false Chr02: 178605-188604 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122310210 5265 Fabidae View MSA
124070809 5270 Rosid View MSA
123743172 5271 Pentapetalae View MSA
122795166 5272 Eudicot View MSA
122051961 5273 Angiosperm View MSA
121349296 5274 Embryophyte View MSA
123425974 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.47391 0.0 15.4002    
cufflinks 12.7181 0.0 33.9923   High
cufflinks 6.05076 0.0 16.8389    
cufflinks 1.82114 0.0 5.92638    
cufflinks 1.39788 0.0 4.70434   Low
cufflinks 6.59428 0.0 18.2159    
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 3.58985 0.0 10.5861    
cufflinks 0.970777 0.0 3.38999   Low
cufflinks 9.107     High  
cufflinks 0.424        
cufflinks 7.804     High  
cufflinks 0.049     Low Low
cufflinks 0.013     Low Low
cufflinks 0.081       Low
cufflinks 31.595     High  
cufflinks 6.548     High  
cufflinks 17.117     High  
cufflinks 13.352     High  
cufflinks 34.283     High  
cufflinks 0.737        
cufflinks 29.011     High  
cufflinks 42.131     High High
cufflinks 1.712        
cufflinks 29.985     High  
cufflinks 2.021        

0 Strain