Gene : Glyma.02G195200 G. max Wm82.a2.v1
Defline:  (1 of 55) PF14244 - gag-polypeptide of LTR copia-type (UBN2_3) Genomic Order:  1952
Name:  ? Glyma.02G195200 Secondary Identifier:  ? PAC:30507263
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.02G195200 0.5kb upstream 0.5kb upstream 788 true Chr02: 36865527-36866314 Glycine max
Glyma.02G195200 0.5kb upstream 0.5kb upstream 500 false Chr02: 36865815-36866314 Glycine max
Glyma.02G195200 0.5kb downstream 0.5kb downstream 788 true Chr02: 36865027-36865814 Glycine max
Glyma.02G195200 0.5kb downstream 0.5kb downstream 500 false Chr02: 36865027-36865526 Glycine max
Glyma.02G195200 1.0kb upstream 1.0kb upstream 1288 true Chr02: 36865527-36866814 Glycine max
Glyma.02G195200 1.0kb upstream 1.0kb upstream 1000 false Chr02: 36865815-36866814 Glycine max
Glyma.02G195200 1.0kb downstream 1.0kb downstream 1288 true Chr02: 36864527-36865814 Glycine max
Glyma.02G195200 1.0kb downstream 1.0kb downstream 1000 false Chr02: 36864527-36865526 Glycine max
Glyma.02G195200 2.0kb upstream 2.0kb upstream 2288 true Chr02: 36865527-36867814 Glycine max
Glyma.02G195200 2.0kb upstream 2.0kb upstream 2000 false Chr02: 36865815-36867814 Glycine max
Glyma.02G195200 2.0kb downstream 2.0kb downstream 2288 true Chr02: 36863527-36865814 Glycine max
Glyma.02G195200 2.0kb downstream 2.0kb downstream 2000 false Chr02: 36863527-36865526 Glycine max
Glyma.02G195200 5.0kb upstream 5.0kb upstream 5288 true Chr02: 36865527-36870814 Glycine max
Glyma.02G195200 5.0kb upstream 5.0kb upstream 5000 false Chr02: 36865815-36870814 Glycine max
Glyma.02G195200 5.0kb downstream 5.0kb downstream 5288 true Chr02: 36860527-36865814 Glycine max
Glyma.02G195200 5.0kb downstream 5.0kb downstream 5000 false Chr02: 36860527-36865526 Glycine max
Glyma.02G195200 10.0kb upstream 10.0kb upstream 10288 true Chr02: 36865527-36875814 Glycine max
Glyma.02G195200 10.0kb upstream 10.0kb upstream 10000 false Chr02: 36865815-36875814 Glycine max
Glyma.02G195200 10.0kb downstream 10.0kb downstream 10288 true Chr02: 36855527-36865814 Glycine max
Glyma.02G195200 10.0kb downstream 10.0kb downstream 10000 false Chr02: 36855527-36865526 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122298158 5265 Fabidae View MSA
124074671 5270 Rosid View MSA
123753620 5271 Pentapetalae View MSA
122797847 5272 Eudicot View MSA
122051084 5273 Angiosperm View MSA
123429186 5275 Viridiplantae View MSA
121351752 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.137        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.108        

0 Strain