Gene : Glyma.19G028800 G. max Wm82.a2.v1
Defline:  (1 of 3) PTHR23151//PTHR23151:SF70 - DIHYDROLIPOAMIDE ACETYL/SUCCINYL-TRANSFERASE-RELATED Genomic Order:  288
Name:  ? Glyma.19G028800 Secondary Identifier:  ? PAC:30512119
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Sequence Feature Displayer

Ontology Annotation Displayer

4 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax PWY0-1264 Glycine max pathologic  
Gmax PWY-4381 Glycine max pathologic  
Gmax PWY-5156 Glycine max pathologic  
Gmax PWY-7388 Glycine max pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.19G028800 0.5kb upstream 0.5kb upstream 4702 true Chr19: 3577519-3582220 Glycine max
Glyma.19G028800 0.5kb upstream 0.5kb upstream 500 false Chr19: 3577519-3578018 Glycine max
Glyma.19G028800 0.5kb downstream 0.5kb downstream 4702 true Chr19: 3578019-3582720 Glycine max
Glyma.19G028800 0.5kb downstream 0.5kb downstream 500 false Chr19: 3582221-3582720 Glycine max
Glyma.19G028800 1.0kb upstream 1.0kb upstream 5202 true Chr19: 3577019-3582220 Glycine max
Glyma.19G028800 1.0kb upstream 1.0kb upstream 1000 false Chr19: 3577019-3578018 Glycine max
Glyma.19G028800 1.0kb downstream 1.0kb downstream 5202 true Chr19: 3578019-3583220 Glycine max
Glyma.19G028800 1.0kb downstream 1.0kb downstream 1000 false Chr19: 3582221-3583220 Glycine max
Glyma.19G028800 2.0kb upstream 2.0kb upstream 6202 true Chr19: 3576019-3582220 Glycine max
Glyma.19G028800 2.0kb upstream 2.0kb upstream 2000 false Chr19: 3576019-3578018 Glycine max
Glyma.19G028800 2.0kb downstream 2.0kb downstream 6202 true Chr19: 3578019-3584220 Glycine max
Glyma.19G028800 2.0kb downstream 2.0kb downstream 2000 false Chr19: 3582221-3584220 Glycine max
Glyma.19G028800 5.0kb upstream 5.0kb upstream 9202 true Chr19: 3573019-3582220 Glycine max
Glyma.19G028800 5.0kb upstream 5.0kb upstream 5000 false Chr19: 3573019-3578018 Glycine max
Glyma.19G028800 5.0kb downstream 5.0kb downstream 9202 true Chr19: 3578019-3587220 Glycine max
Glyma.19G028800 5.0kb downstream 5.0kb downstream 5000 false Chr19: 3582221-3587220 Glycine max
Glyma.19G028800 10.0kb upstream 10.0kb upstream 14202 true Chr19: 3568019-3582220 Glycine max
Glyma.19G028800 10.0kb upstream 10.0kb upstream 10000 false Chr19: 3568019-3578018 Glycine max
Glyma.19G028800 10.0kb downstream 10.0kb downstream 14202 true Chr19: 3578019-3592220 Glycine max
Glyma.19G028800 10.0kb downstream 10.0kb downstream 10000 false Chr19: 3582221-3592220 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122311832 5265 Fabidae View MSA
124069770 5270 Rosid View MSA
123741689 5271 Pentapetalae View MSA
122795242 5272 Eudicot View MSA
122043144 5273 Angiosperm View MSA
121346326 5274 Embryophyte View MSA
123424113 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.82532 0.0 14.2034   Low
cufflinks 24.9803 0.0 66.878 High  
cufflinks 6.01547 0.0 17.1696   Low
cufflinks 21.8289 0.0 58.2866 High  
cufflinks 25.0696 0.0 67.1021 High  
cufflinks 20.3846 0.0 54.3913    
cufflinks 81.1341 0.0 241.323 High High
cufflinks 18.2526 0.0 48.6983    
cufflinks 11.9825 0.0 32.3274    
cufflinks 9.728     High  
cufflinks 0.546       Low
cufflinks 4.83        
cufflinks 9.111     High  
cufflinks 13.032     High  
cufflinks 0.275       Low
cufflinks 9.0     High  
cufflinks 2.205        
cufflinks 16.639     High High
cufflinks 11.317     High  
cufflinks 5.94        
cufflinks 1.262        
cufflinks 7.023        
cufflinks 10.722     High  
cufflinks 0.474       Low
cufflinks 7.074     High  
cufflinks 2.362        

0 Strain