Gene : Glyma.02G200600 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR32285:SF53 - PROTEIN TRICHOME BIREFRINGENCE-LIKE 8-RELATED Genomic Order:  2006
Name:  ? Glyma.02G200600 Secondary Identifier:  ? PAC:30509168
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.02G200600 0.5kb upstream 0.5kb upstream 4230 true Chr02: 38431834-38436063 Glycine max
Glyma.02G200600 0.5kb upstream 0.5kb upstream 500 false Chr02: 38431834-38432333 Glycine max
Glyma.02G200600 0.5kb downstream 0.5kb downstream 4230 true Chr02: 38432334-38436563 Glycine max
Glyma.02G200600 0.5kb downstream 0.5kb downstream 500 false Chr02: 38436064-38436563 Glycine max
Glyma.02G200600 1.0kb upstream 1.0kb upstream 4730 true Chr02: 38431334-38436063 Glycine max
Glyma.02G200600 1.0kb upstream 1.0kb upstream 1000 false Chr02: 38431334-38432333 Glycine max
Glyma.02G200600 1.0kb downstream 1.0kb downstream 4730 true Chr02: 38432334-38437063 Glycine max
Glyma.02G200600 1.0kb downstream 1.0kb downstream 1000 false Chr02: 38436064-38437063 Glycine max
Glyma.02G200600 2.0kb upstream 2.0kb upstream 5730 true Chr02: 38430334-38436063 Glycine max
Glyma.02G200600 2.0kb upstream 2.0kb upstream 2000 false Chr02: 38430334-38432333 Glycine max
Glyma.02G200600 2.0kb downstream 2.0kb downstream 5730 true Chr02: 38432334-38438063 Glycine max
Glyma.02G200600 2.0kb downstream 2.0kb downstream 2000 false Chr02: 38436064-38438063 Glycine max
Glyma.02G200600 5.0kb upstream 5.0kb upstream 8730 true Chr02: 38427334-38436063 Glycine max
Glyma.02G200600 5.0kb upstream 5.0kb upstream 5000 false Chr02: 38427334-38432333 Glycine max
Glyma.02G200600 5.0kb downstream 5.0kb downstream 8730 true Chr02: 38432334-38441063 Glycine max
Glyma.02G200600 5.0kb downstream 5.0kb downstream 5000 false Chr02: 38436064-38441063 Glycine max
Glyma.02G200600 10.0kb upstream 10.0kb upstream 13730 true Chr02: 38422334-38436063 Glycine max
Glyma.02G200600 10.0kb upstream 10.0kb upstream 10000 false Chr02: 38422334-38432333 Glycine max
Glyma.02G200600 10.0kb downstream 10.0kb downstream 13730 true Chr02: 38432334-38446063 Glycine max
Glyma.02G200600 10.0kb downstream 10.0kb downstream 10000 false Chr02: 38436064-38446063 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122302332 5265 Fabidae View MSA
124060600 5270 Rosid View MSA
123745624 5271 Pentapetalae View MSA
122797188 5272 Eudicot View MSA
122050805 5273 Angiosperm View MSA
123428901 5275 Viridiplantae View MSA
121350671 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.044151 0.0 2.02024 Low  
cufflinks 0.0738038 0.0 1.83398 Low  
cufflinks 0.0188348 0.0 1.02346 Low Low
cufflinks 0.0403196 0.0 1.20091 Low  
cufflinks 0.0374318 0.0 1.07166 Low  
cufflinks 0.110342 0.0 1.80601 Low  
cufflinks 0.0130343 0.0 0.880406 Low Low
cufflinks 0.633533 0.0 5.35991   High
cufflinks 0.148897 0.0 2.04823 Low  
cufflinks 0.077     Low  
cufflinks 0.011     Low Low
cufflinks 0.048     Low  
cufflinks 0.038     Low  
cufflinks 0.028     Low  
cufflinks 0.03     Low  
cufflinks 0.153       High
cufflinks 0.029     Low  
cufflinks 0.076     Low  
cufflinks 0.03     Low  
cufflinks 0.125       High
cufflinks 0.006     Low Low
cufflinks 0.165       High
cufflinks 0.064     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.087     Low  
cufflinks 0.026     Low  

0 Strain