Gene : Glyma.02G150100 G. max Wm82.a2.v1
Defline:  (1 of 1) PTHR37236:SF1 - AUXIN-BINDING PROTEIN 1 Genomic Order:  1501
Name:  ? Glyma.02G150100 Secondary Identifier:  ? PAC:30506759
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.02G150100 0.5kb upstream 0.5kb upstream 4833 true Chr02: 15427118-15431950 Glycine max
Glyma.02G150100 0.5kb upstream 0.5kb upstream 500 false Chr02: 15431451-15431950 Glycine max
Glyma.02G150100 0.5kb downstream 0.5kb downstream 4833 true Chr02: 15426618-15431450 Glycine max
Glyma.02G150100 0.5kb downstream 0.5kb downstream 500 false Chr02: 15426618-15427117 Glycine max
Glyma.02G150100 1.0kb upstream 1.0kb upstream 5333 true Chr02: 15427118-15432450 Glycine max
Glyma.02G150100 1.0kb upstream 1.0kb upstream 1000 false Chr02: 15431451-15432450 Glycine max
Glyma.02G150100 1.0kb downstream 1.0kb downstream 5333 true Chr02: 15426118-15431450 Glycine max
Glyma.02G150100 1.0kb downstream 1.0kb downstream 1000 false Chr02: 15426118-15427117 Glycine max
Glyma.02G150100 2.0kb upstream 2.0kb upstream 6333 true Chr02: 15427118-15433450 Glycine max
Glyma.02G150100 2.0kb upstream 2.0kb upstream 2000 false Chr02: 15431451-15433450 Glycine max
Glyma.02G150100 2.0kb downstream 2.0kb downstream 6333 true Chr02: 15425118-15431450 Glycine max
Glyma.02G150100 2.0kb downstream 2.0kb downstream 2000 false Chr02: 15425118-15427117 Glycine max
Glyma.02G150100 5.0kb upstream 5.0kb upstream 9333 true Chr02: 15427118-15436450 Glycine max
Glyma.02G150100 5.0kb upstream 5.0kb upstream 5000 false Chr02: 15431451-15436450 Glycine max
Glyma.02G150100 5.0kb downstream 5.0kb downstream 9333 true Chr02: 15422118-15431450 Glycine max
Glyma.02G150100 5.0kb downstream 5.0kb downstream 5000 false Chr02: 15422118-15427117 Glycine max
Glyma.02G150100 10.0kb upstream 10.0kb upstream 14333 true Chr02: 15427118-15441450 Glycine max
Glyma.02G150100 10.0kb upstream 10.0kb upstream 10000 false Chr02: 15431451-15441450 Glycine max
Glyma.02G150100 10.0kb downstream 10.0kb downstream 14333 true Chr02: 15417118-15431450 Glycine max
Glyma.02G150100 10.0kb downstream 10.0kb downstream 10000 false Chr02: 15417118-15427117 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122302147 5265 Fabidae View MSA
124068564 5270 Rosid View MSA
123737576 5271 Pentapetalae View MSA
122787976 5272 Eudicot View MSA
122049427 5273 Angiosperm View MSA
121346924 5274 Embryophyte View MSA
123426893 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.57524 0.0 20.4855    
cufflinks 2.41889 0.0 12.4276   Low
cufflinks 2.34423 0.0 11.9658   Low
cufflinks 4.18756 0.0 18.4035    
cufflinks 3.87485 0.0 17.7684    
cufflinks 2.90216 0.0 14.0977    
cufflinks 6.70661 0.0 30.7049   High
cufflinks 3.40758 0.0 16.091    
cufflinks 4.96199 0.0 20.473    
cufflinks 0.253        
cufflinks 0.337        
cufflinks 0.394        
cufflinks 0.558       High
cufflinks 0.851       High
cufflinks 0.462        
cufflinks 0.288        
cufflinks 0.198       Low
cufflinks 0.354        
cufflinks 0.405        
cufflinks 0.166       Low
cufflinks 0.269        
cufflinks 0.197       Low
cufflinks 0.239        
cufflinks 0.313        
cufflinks 0.267        
cufflinks 0.226        

0 Strain