Gene : Glyma.02G152700 G. max Wm82.a2.v1
Defline:  (1 of 1) PTHR16517//PTHR16517:SF34 - TUBBY-RELATED Genomic Order:  1527
Name:  ? Glyma.02G152700 Secondary Identifier:  ? PAC:30507343
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0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.02G152700 0.5kb upstream 0.5kb upstream 4740 true Chr02: 15664664-15669403 Glycine max
Glyma.02G152700 0.5kb upstream 0.5kb upstream 500 false Chr02: 15664664-15665163 Glycine max
Glyma.02G152700 0.5kb downstream 0.5kb downstream 4740 true Chr02: 15665164-15669903 Glycine max
Glyma.02G152700 0.5kb downstream 0.5kb downstream 500 false Chr02: 15669404-15669903 Glycine max
Glyma.02G152700 1.0kb upstream 1.0kb upstream 5240 true Chr02: 15664164-15669403 Glycine max
Glyma.02G152700 1.0kb upstream 1.0kb upstream 1000 false Chr02: 15664164-15665163 Glycine max
Glyma.02G152700 1.0kb downstream 1.0kb downstream 5240 true Chr02: 15665164-15670403 Glycine max
Glyma.02G152700 1.0kb downstream 1.0kb downstream 1000 false Chr02: 15669404-15670403 Glycine max
Glyma.02G152700 2.0kb upstream 2.0kb upstream 6240 true Chr02: 15663164-15669403 Glycine max
Glyma.02G152700 2.0kb upstream 2.0kb upstream 2000 false Chr02: 15663164-15665163 Glycine max
Glyma.02G152700 2.0kb downstream 2.0kb downstream 6240 true Chr02: 15665164-15671403 Glycine max
Glyma.02G152700 2.0kb downstream 2.0kb downstream 2000 false Chr02: 15669404-15671403 Glycine max
Glyma.02G152700 5.0kb upstream 5.0kb upstream 9240 true Chr02: 15660164-15669403 Glycine max
Glyma.02G152700 5.0kb upstream 5.0kb upstream 5000 false Chr02: 15660164-15665163 Glycine max
Glyma.02G152700 5.0kb downstream 5.0kb downstream 9240 true Chr02: 15665164-15674403 Glycine max
Glyma.02G152700 5.0kb downstream 5.0kb downstream 5000 false Chr02: 15669404-15674403 Glycine max
Glyma.02G152700 10.0kb upstream 10.0kb upstream 14240 true Chr02: 15655164-15669403 Glycine max
Glyma.02G152700 10.0kb upstream 10.0kb upstream 10000 false Chr02: 15655164-15665163 Glycine max
Glyma.02G152700 10.0kb downstream 10.0kb downstream 14240 true Chr02: 15665164-15679403 Glycine max
Glyma.02G152700 10.0kb downstream 10.0kb downstream 10000 false Chr02: 15669404-15679403 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122310760 5265 Fabidae View MSA
124069789 5270 Rosid View MSA
123743199 5271 Pentapetalae View MSA
122785867 5272 Eudicot View MSA
122047610 5273 Angiosperm View MSA
123429062 5275 Viridiplantae View MSA
121348967 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 11.4715 0.0 30.772   Low
cufflinks 24.7322 0.0 66.6748 High  
cufflinks 14.6318 0.0 39.0435    
cufflinks 28.1841 0.0 76.5306 High High
cufflinks 16.3368 0.0 43.5861    
cufflinks 12.2159 0.0 32.6957   Low
cufflinks 26.1878 0.0 70.7891 High High
cufflinks 21.6933 0.0 58.2005 High  
cufflinks 16.0777 0.0 42.8947    
cufflinks 9.075     High  
cufflinks 5.526     High  
cufflinks 9.193     High  
cufflinks 5.676        
cufflinks 5.644        
cufflinks 3.985       Low
cufflinks 11.901     High  
cufflinks 4.127       Low
cufflinks 9.277     High  
cufflinks 11.423     High  
cufflinks 16.284     High High
cufflinks 5.078        
cufflinks 14.533     High High
cufflinks 9.214     High  
cufflinks 6.309     High  
cufflinks 13.753     High High
cufflinks 3.409       Low

0 Strain