Gene : Glyma.19G021500 G. max Wm82.a2.v1

Defline:  (1 of 2) PTHR24221:SF149 - ABC TRANSPORTER B FAMILY MEMBER 19 Genomic Order:  215
Name:  ? Glyma.19G021500 Secondary Identifier:  ? PAC:30514204

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.19G021500 0.5kb upstream 0.5kb upstream 10994 true Chr19: 2352336-2363329 Glycine max
Glyma.19G021500 0.5kb upstream 0.5kb upstream 500 false Chr19: 2362830-2363329 Glycine max
Glyma.19G021500 0.5kb downstream 0.5kb downstream 10994 true Chr19: 2351836-2362829 Glycine max
Glyma.19G021500 0.5kb downstream 0.5kb downstream 500 false Chr19: 2351836-2352335 Glycine max
Glyma.19G021500 1.0kb upstream 1.0kb upstream 11494 true Chr19: 2352336-2363829 Glycine max
Glyma.19G021500 1.0kb upstream 1.0kb upstream 1000 false Chr19: 2362830-2363829 Glycine max
Glyma.19G021500 1.0kb downstream 1.0kb downstream 11494 true Chr19: 2351336-2362829 Glycine max
Glyma.19G021500 1.0kb downstream 1.0kb downstream 1000 false Chr19: 2351336-2352335 Glycine max
Glyma.19G021500 2.0kb upstream 2.0kb upstream 12494 true Chr19: 2352336-2364829 Glycine max
Glyma.19G021500 2.0kb upstream 2.0kb upstream 2000 false Chr19: 2362830-2364829 Glycine max
Glyma.19G021500 2.0kb downstream 2.0kb downstream 12494 true Chr19: 2350336-2362829 Glycine max
Glyma.19G021500 2.0kb downstream 2.0kb downstream 2000 false Chr19: 2350336-2352335 Glycine max
Glyma.19G021500 5.0kb upstream 5.0kb upstream 15494 true Chr19: 2352336-2367829 Glycine max
Glyma.19G021500 5.0kb upstream 5.0kb upstream 5000 false Chr19: 2362830-2367829 Glycine max
Glyma.19G021500 5.0kb downstream 5.0kb downstream 15494 true Chr19: 2347336-2362829 Glycine max
Glyma.19G021500 5.0kb downstream 5.0kb downstream 5000 false Chr19: 2347336-2352335 Glycine max
Glyma.19G021500 10.0kb upstream 10.0kb upstream 20494 true Chr19: 2352336-2372829 Glycine max
Glyma.19G021500 10.0kb upstream 10.0kb upstream 10000 false Chr19: 2362830-2372829 Glycine max
Glyma.19G021500 10.0kb downstream 10.0kb downstream 20494 true Chr19: 2342336-2362829 Glycine max
Glyma.19G021500 10.0kb downstream 10.0kb downstream 10000 false Chr19: 2342336-2352335 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122308461 5265 Fabidae View MSA
124068120 5270 Rosid View MSA
123742106 5271 Pentapetalae View MSA
122796466 5272 Eudicot View MSA
122044866 5273 Angiosperm View MSA
123429075 5275 Viridiplantae View MSA
121350880 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.76782 0.0 10.1956   Low
cufflinks 46.2871 0.0 152.158 High High
cufflinks 13.6781 0.0 37.6701    
cufflinks 24.3959 0.0 71.7981 High  
cufflinks 26.1629 0.0 77.7657 High  
cufflinks 11.163 0.0 30.2795    
cufflinks 14.2085 0.0 39.2354    
cufflinks 13.2754 0.0 36.4823    
cufflinks 9.33534 0.0 25.1003    
cufflinks 8.522     High  
cufflinks 0.63       Low
cufflinks 12.741     High  
cufflinks 12.75     High  
cufflinks 16.52     High High
cufflinks 0.119       Low
cufflinks 4.227        
cufflinks 1.224        
cufflinks 17.833     High High
cufflinks 23.548     High High
cufflinks 3.803        
cufflinks 1.827        
cufflinks 4.462        
cufflinks 4.481        
cufflinks 0.704       Low
cufflinks 4.336        
cufflinks 2.531        

0 Strain