Gene : Glyma.19G022800 G. max Wm82.a2.v1
Defline:  (1 of 2) PF06470//PF13304 - SMC proteins Flexible Hinge Domain (SMC_hinge) // AAA domain, putative AbiEii toxin, Type IV TA system (AAA_21) Genomic Order:  228
Name:  ? Glyma.19G022800 Secondary Identifier:  ? PAC:30513539
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.19G022800 0.5kb upstream 0.5kb upstream 12479 true Chr19: 2599705-2612183 Glycine max
Glyma.19G022800 0.5kb upstream 0.5kb upstream 500 false Chr19: 2599705-2600204 Glycine max
Glyma.19G022800 0.5kb downstream 0.5kb downstream 12479 true Chr19: 2600205-2612683 Glycine max
Glyma.19G022800 0.5kb downstream 0.5kb downstream 500 false Chr19: 2612184-2612683 Glycine max
Glyma.19G022800 1.0kb upstream 1.0kb upstream 12979 true Chr19: 2599205-2612183 Glycine max
Glyma.19G022800 1.0kb upstream 1.0kb upstream 1000 false Chr19: 2599205-2600204 Glycine max
Glyma.19G022800 1.0kb downstream 1.0kb downstream 12979 true Chr19: 2600205-2613183 Glycine max
Glyma.19G022800 1.0kb downstream 1.0kb downstream 1000 false Chr19: 2612184-2613183 Glycine max
Glyma.19G022800 2.0kb upstream 2.0kb upstream 13979 true Chr19: 2598205-2612183 Glycine max
Glyma.19G022800 2.0kb upstream 2.0kb upstream 2000 false Chr19: 2598205-2600204 Glycine max
Glyma.19G022800 2.0kb downstream 2.0kb downstream 13979 true Chr19: 2600205-2614183 Glycine max
Glyma.19G022800 2.0kb downstream 2.0kb downstream 2000 false Chr19: 2612184-2614183 Glycine max
Glyma.19G022800 5.0kb upstream 5.0kb upstream 16979 true Chr19: 2595205-2612183 Glycine max
Glyma.19G022800 5.0kb upstream 5.0kb upstream 5000 false Chr19: 2595205-2600204 Glycine max
Glyma.19G022800 5.0kb downstream 5.0kb downstream 16979 true Chr19: 2600205-2617183 Glycine max
Glyma.19G022800 5.0kb downstream 5.0kb downstream 5000 false Chr19: 2612184-2617183 Glycine max
Glyma.19G022800 10.0kb upstream 10.0kb upstream 21979 true Chr19: 2590205-2612183 Glycine max
Glyma.19G022800 10.0kb upstream 10.0kb upstream 10000 false Chr19: 2590205-2600204 Glycine max
Glyma.19G022800 10.0kb downstream 10.0kb downstream 21979 true Chr19: 2600205-2622183 Glycine max
Glyma.19G022800 10.0kb downstream 10.0kb downstream 10000 false Chr19: 2612184-2622183 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041050 5273 Angiosperm View MSA
122312234 5265 Fabidae View MSA
124066334 5270 Rosid View MSA
123740153 5271 Pentapetalae View MSA
122789299 5272 Eudicot View MSA
121345336 5274 Embryophyte View MSA
123424824 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.253167 0.0 1.14053   Low
cufflinks 8.4367 0.0 29.6846   High
cufflinks 1.63907 0.0 6.95915    
cufflinks 3.34703 0.0 12.6334    
cufflinks 4.62109 0.0 16.2097    
cufflinks 2.28948 0.0 10.4661    
cufflinks 3.22344 0.0 12.9487    
cufflinks 1.8152 0.0 6.45842    
cufflinks 5.50884 0.0 19.0789    
cufflinks 0.856        
cufflinks 0.258       Low
cufflinks 1.092        
cufflinks 1.812        
cufflinks 1.761        
cufflinks 0.177       Low
cufflinks 2.232       High
cufflinks 0.208       Low
cufflinks 0.653        
cufflinks 2.732       High
cufflinks 1.46        
cufflinks 0.36        
cufflinks 1.94        
cufflinks 2.372       High
cufflinks 0.269       Low
cufflinks 1.622        
cufflinks 0.556        

0 Strain