Gene : Glyma.02G165500 G. max Wm82.a2.v1
Defline:  (1 of 3) 1.1.5.3 - Glycerol-3-phosphate dehydrogenase / sn-glycerol-3-phosphate dehydrogenase Genomic Order:  1655
Name:  ? Glyma.02G165500 Secondary Identifier:  ? PAC:30509382
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax PWY-4261 Glycine max pathologic  
Gmax PWY-6118 Glycine max pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.02G165500 0.5kb upstream 0.5kb upstream 9227 true Chr02: 24443052-24452278 Glycine max
Glyma.02G165500 0.5kb upstream 0.5kb upstream 500 false Chr02: 24443052-24443551 Glycine max
Glyma.02G165500 0.5kb downstream 0.5kb downstream 9227 true Chr02: 24443552-24452778 Glycine max
Glyma.02G165500 0.5kb downstream 0.5kb downstream 500 false Chr02: 24452279-24452778 Glycine max
Glyma.02G165500 1.0kb upstream 1.0kb upstream 9727 true Chr02: 24442552-24452278 Glycine max
Glyma.02G165500 1.0kb upstream 1.0kb upstream 1000 false Chr02: 24442552-24443551 Glycine max
Glyma.02G165500 1.0kb downstream 1.0kb downstream 9727 true Chr02: 24443552-24453278 Glycine max
Glyma.02G165500 1.0kb downstream 1.0kb downstream 1000 false Chr02: 24452279-24453278 Glycine max
Glyma.02G165500 2.0kb upstream 2.0kb upstream 10727 true Chr02: 24441552-24452278 Glycine max
Glyma.02G165500 2.0kb upstream 2.0kb upstream 2000 false Chr02: 24441552-24443551 Glycine max
Glyma.02G165500 2.0kb downstream 2.0kb downstream 10727 true Chr02: 24443552-24454278 Glycine max
Glyma.02G165500 2.0kb downstream 2.0kb downstream 2000 false Chr02: 24452279-24454278 Glycine max
Glyma.02G165500 5.0kb upstream 5.0kb upstream 13727 true Chr02: 24438552-24452278 Glycine max
Glyma.02G165500 5.0kb upstream 5.0kb upstream 5000 false Chr02: 24438552-24443551 Glycine max
Glyma.02G165500 5.0kb downstream 5.0kb downstream 13727 true Chr02: 24443552-24457278 Glycine max
Glyma.02G165500 5.0kb downstream 5.0kb downstream 5000 false Chr02: 24452279-24457278 Glycine max
Glyma.02G165500 10.0kb upstream 10.0kb upstream 18727 true Chr02: 24433552-24452278 Glycine max
Glyma.02G165500 10.0kb upstream 10.0kb upstream 10000 false Chr02: 24433552-24443551 Glycine max
Glyma.02G165500 10.0kb downstream 10.0kb downstream 18727 true Chr02: 24443552-24462278 Glycine max
Glyma.02G165500 10.0kb downstream 10.0kb downstream 10000 false Chr02: 24452279-24462278 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122303062 5265 Fabidae View MSA
124061929 5270 Rosid View MSA
123753233 5271 Pentapetalae View MSA
122790544 5272 Eudicot View MSA
122048322 5273 Angiosperm View MSA
121344080 5274 Embryophyte View MSA
123427532 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 12.8404 0.0 44.2693   High
cufflinks 10.0178 0.0 34.9106    
cufflinks 10.5391 0.0 36.9808    
cufflinks 10.2306 0.0 35.8188    
cufflinks 9.61018 0.0 34.5162    
cufflinks 13.5057 0.0 46.9376   High
cufflinks 6.49225 0.0 24.1553   Low
cufflinks 11.8902 0.0 41.6006    
cufflinks 8.38559 0.0 30.1205    
cufflinks 1.074       High
cufflinks 0.833        
cufflinks 0.86        
cufflinks 0.922        
cufflinks 0.744        
cufflinks 0.913        
cufflinks 0.772        
cufflinks 0.694       Low
cufflinks 0.736        
cufflinks 1.146       High
cufflinks 0.717        
cufflinks 0.809        
cufflinks 0.821        
cufflinks 0.632       Low
cufflinks 0.891        
cufflinks 0.686       Low
cufflinks 0.797        

0 Strain