Gene : Glyma.02G178300 G. max Wm82.a2.v1
Defline:  (1 of 56) PF12796//PF13962 - Ankyrin repeats (3 copies) (Ank_2) // Domain of unknown function (PGG) Genomic Order:  1783
Name:  ? Glyma.02G178300 Secondary Identifier:  ? PAC:30507322
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.02G178300 0.5kb upstream 0.5kb upstream 9700 true Chr02: 30014296-30023995 Glycine max
Glyma.02G178300 0.5kb upstream 0.5kb upstream 500 false Chr02: 30023496-30023995 Glycine max
Glyma.02G178300 0.5kb downstream 0.5kb downstream 9700 true Chr02: 30013796-30023495 Glycine max
Glyma.02G178300 0.5kb downstream 0.5kb downstream 500 false Chr02: 30013796-30014295 Glycine max
Glyma.02G178300 1.0kb upstream 1.0kb upstream 10200 true Chr02: 30014296-30024495 Glycine max
Glyma.02G178300 1.0kb upstream 1.0kb upstream 1000 false Chr02: 30023496-30024495 Glycine max
Glyma.02G178300 1.0kb downstream 1.0kb downstream 10200 true Chr02: 30013296-30023495 Glycine max
Glyma.02G178300 1.0kb downstream 1.0kb downstream 1000 false Chr02: 30013296-30014295 Glycine max
Glyma.02G178300 2.0kb upstream 2.0kb upstream 11200 true Chr02: 30014296-30025495 Glycine max
Glyma.02G178300 2.0kb upstream 2.0kb upstream 2000 false Chr02: 30023496-30025495 Glycine max
Glyma.02G178300 2.0kb downstream 2.0kb downstream 11200 true Chr02: 30012296-30023495 Glycine max
Glyma.02G178300 2.0kb downstream 2.0kb downstream 2000 false Chr02: 30012296-30014295 Glycine max
Glyma.02G178300 5.0kb upstream 5.0kb upstream 14200 true Chr02: 30014296-30028495 Glycine max
Glyma.02G178300 5.0kb upstream 5.0kb upstream 5000 false Chr02: 30023496-30028495 Glycine max
Glyma.02G178300 5.0kb downstream 5.0kb downstream 14200 true Chr02: 30009296-30023495 Glycine max
Glyma.02G178300 5.0kb downstream 5.0kb downstream 5000 false Chr02: 30009296-30014295 Glycine max
Glyma.02G178300 10.0kb upstream 10.0kb upstream 19200 true Chr02: 30014296-30033495 Glycine max
Glyma.02G178300 10.0kb upstream 10.0kb upstream 10000 false Chr02: 30023496-30033495 Glycine max
Glyma.02G178300 10.0kb downstream 10.0kb downstream 19200 true Chr02: 30004296-30023495 Glycine max
Glyma.02G178300 10.0kb downstream 10.0kb downstream 10000 false Chr02: 30004296-30014295 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122310241 5265 Fabidae View MSA
124074259 5270 Rosid View MSA
123753624 5271 Pentapetalae View MSA
122797775 5272 Eudicot View MSA
122051097 5273 Angiosperm View MSA
123429169 5275 Viridiplantae View MSA
121351705 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.24885 0.0 20.3163    
cufflinks 11.2366 0.0 38.6835   High
cufflinks 5.7676 0.0 21.5475    
cufflinks 8.78592 0.0 30.8151    
cufflinks 3.09985 0.0 11.9349    
cufflinks 1.07551 0.0 5.66778   Low
cufflinks 8.27715 0.0 25.5529    
cufflinks 8.45297 0.0 29.825    
cufflinks 4.68863 0.0 15.9796    
cufflinks 1.489        
cufflinks 0.099       Low
cufflinks 1.272        
cufflinks 0.665        
cufflinks 0.303        
cufflinks 0.042     Low Low
cufflinks 1.192        
cufflinks 0.402        
cufflinks 1.529        
cufflinks 1.672        
cufflinks 1.138        
cufflinks 0.112       Low
cufflinks 1.521        
cufflinks 1.508        
cufflinks 0.271        
cufflinks 1.042        
cufflinks 0.356        

0 Strain