Gene : Glyma.02G124400 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR10971//PTHR10971:SF16 - MRNA EXPORT FACTOR AND BUB3 Genomic Order:  1244
Name:  ? Glyma.02G124400 Secondary Identifier:  ? PAC:30509791
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.02G124400 0.5kb upstream 0.5kb upstream 6972 true Chr02: 12437119-12444090 Glycine max
Glyma.02G124400 0.5kb upstream 0.5kb upstream 500 false Chr02: 12443591-12444090 Glycine max
Glyma.02G124400 0.5kb downstream 0.5kb downstream 6972 true Chr02: 12436619-12443590 Glycine max
Glyma.02G124400 0.5kb downstream 0.5kb downstream 500 false Chr02: 12436619-12437118 Glycine max
Glyma.02G124400 1.0kb upstream 1.0kb upstream 7472 true Chr02: 12437119-12444590 Glycine max
Glyma.02G124400 1.0kb upstream 1.0kb upstream 1000 false Chr02: 12443591-12444590 Glycine max
Glyma.02G124400 1.0kb downstream 1.0kb downstream 7472 true Chr02: 12436119-12443590 Glycine max
Glyma.02G124400 1.0kb downstream 1.0kb downstream 1000 false Chr02: 12436119-12437118 Glycine max
Glyma.02G124400 2.0kb upstream 2.0kb upstream 8472 true Chr02: 12437119-12445590 Glycine max
Glyma.02G124400 2.0kb upstream 2.0kb upstream 2000 false Chr02: 12443591-12445590 Glycine max
Glyma.02G124400 2.0kb downstream 2.0kb downstream 8472 true Chr02: 12435119-12443590 Glycine max
Glyma.02G124400 2.0kb downstream 2.0kb downstream 2000 false Chr02: 12435119-12437118 Glycine max
Glyma.02G124400 5.0kb upstream 5.0kb upstream 11472 true Chr02: 12437119-12448590 Glycine max
Glyma.02G124400 5.0kb upstream 5.0kb upstream 5000 false Chr02: 12443591-12448590 Glycine max
Glyma.02G124400 5.0kb downstream 5.0kb downstream 11472 true Chr02: 12432119-12443590 Glycine max
Glyma.02G124400 5.0kb downstream 5.0kb downstream 5000 false Chr02: 12432119-12437118 Glycine max
Glyma.02G124400 10.0kb upstream 10.0kb upstream 16472 true Chr02: 12437119-12453590 Glycine max
Glyma.02G124400 10.0kb upstream 10.0kb upstream 10000 false Chr02: 12443591-12453590 Glycine max
Glyma.02G124400 10.0kb downstream 10.0kb downstream 16472 true Chr02: 12427119-12443590 Glycine max
Glyma.02G124400 10.0kb downstream 10.0kb downstream 10000 false Chr02: 12427119-12437118 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122296457 5265 Fabidae View MSA
124073697 5270 Rosid View MSA
123740132 5271 Pentapetalae View MSA
122786172 5272 Eudicot View MSA
122042372 5273 Angiosperm View MSA
121348493 5274 Embryophyte View MSA
123423920 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 9.61753 0.0 26.3892    
cufflinks 11.3821 0.0 30.892    
cufflinks 6.86971 0.0 19.4076   Low
cufflinks 11.879 0.0 32.1315    
cufflinks 10.7373 0.0 29.2228    
cufflinks 11.8493 0.0 32.0746    
cufflinks 9.04381 0.0 24.9386    
cufflinks 17.6546 0.0 47.1363   High
cufflinks 10.9882 0.0 29.8573    
cufflinks 2.32        
cufflinks 1.188       Low
cufflinks 2.433        
cufflinks 3.065       High
cufflinks 3.263       High
cufflinks 1.303       Low
cufflinks 2.023        
cufflinks 1.492        
cufflinks 2.229        
cufflinks 2.812       High
cufflinks 1.643        
cufflinks 1.857        
cufflinks 1.681        
cufflinks 2.727       High
cufflinks 1.167       Low
cufflinks 1.621        
cufflinks 1.436        

0 Strain