Gene : Glyma.19G016000 G. max Wm82.a2.v1
Defline:  (1 of 16) PF05542 - Protein of unknown function (DUF760) (DUF760) Genomic Order:  160
Name:  ? Glyma.19G016000 Secondary Identifier:  ? PAC:30511376
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.19G016000 0.5kb upstream 0.5kb upstream 4450 true Chr19: 1584785-1589234 Glycine max
Glyma.19G016000 0.5kb upstream 0.5kb upstream 500 false Chr19: 1584785-1585284 Glycine max
Glyma.19G016000 0.5kb downstream 0.5kb downstream 4450 true Chr19: 1585285-1589734 Glycine max
Glyma.19G016000 0.5kb downstream 0.5kb downstream 500 false Chr19: 1589235-1589734 Glycine max
Glyma.19G016000 1.0kb upstream 1.0kb upstream 4950 true Chr19: 1584285-1589234 Glycine max
Glyma.19G016000 1.0kb upstream 1.0kb upstream 1000 false Chr19: 1584285-1585284 Glycine max
Glyma.19G016000 1.0kb downstream 1.0kb downstream 4950 true Chr19: 1585285-1590234 Glycine max
Glyma.19G016000 1.0kb downstream 1.0kb downstream 1000 false Chr19: 1589235-1590234 Glycine max
Glyma.19G016000 2.0kb upstream 2.0kb upstream 5950 true Chr19: 1583285-1589234 Glycine max
Glyma.19G016000 2.0kb upstream 2.0kb upstream 2000 false Chr19: 1583285-1585284 Glycine max
Glyma.19G016000 2.0kb downstream 2.0kb downstream 5950 true Chr19: 1585285-1591234 Glycine max
Glyma.19G016000 2.0kb downstream 2.0kb downstream 2000 false Chr19: 1589235-1591234 Glycine max
Glyma.19G016000 5.0kb upstream 5.0kb upstream 8950 true Chr19: 1580285-1589234 Glycine max
Glyma.19G016000 5.0kb upstream 5.0kb upstream 5000 false Chr19: 1580285-1585284 Glycine max
Glyma.19G016000 5.0kb downstream 5.0kb downstream 8950 true Chr19: 1585285-1594234 Glycine max
Glyma.19G016000 5.0kb downstream 5.0kb downstream 5000 false Chr19: 1589235-1594234 Glycine max
Glyma.19G016000 10.0kb upstream 10.0kb upstream 13950 true Chr19: 1575285-1589234 Glycine max
Glyma.19G016000 10.0kb upstream 10.0kb upstream 10000 false Chr19: 1575285-1585284 Glycine max
Glyma.19G016000 10.0kb downstream 10.0kb downstream 13950 true Chr19: 1585285-1599234 Glycine max
Glyma.19G016000 10.0kb downstream 10.0kb downstream 10000 false Chr19: 1589235-1599234 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122307743 5265 Fabidae View MSA
124068808 5270 Rosid View MSA
123749581 5271 Pentapetalae View MSA
122787342 5272 Eudicot View MSA
122046026 5273 Angiosperm View MSA
121350732 5274 Embryophyte View MSA
123426159 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 35.6259 0.0 95.6007 High High
cufflinks 8.69505 0.0 24.6208    
cufflinks 14.1682 0.0 38.5315    
cufflinks 12.9528 0.0 35.4083    
cufflinks 12.5839 0.0 34.4014    
cufflinks 5.27845 0.0 15.9103   Low
cufflinks 8.85567 0.0 25.0072    
cufflinks 14.8928 0.0 40.3265    
cufflinks 11.3579 0.0 31.3137    
cufflinks 2.402        
cufflinks 3.065        
cufflinks 3.581        
cufflinks 1.26       Low
cufflinks 0.893       Low
cufflinks 5.509     High High
cufflinks 3.866        
cufflinks 1.967        
cufflinks 2.094        
cufflinks 2.665        
cufflinks 3.831        
cufflinks 2.039        
cufflinks 3.45        
cufflinks 3.253        
cufflinks 2.753        
cufflinks 3.791        
cufflinks 2.571        

0 Strain