Gene : Glyma.02G132500 G. max Wm82.a2.v1
Defline:  (1 of 354) PF00847 - AP2 domain (AP2) Genomic Order:  1325
Name:  ? Glyma.02G132500 Secondary Identifier:  ? PAC:30507449
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.02G132500 0.5kb upstream 0.5kb upstream 1562 true Chr02: 13730974-13732535 Glycine max
Glyma.02G132500 0.5kb upstream 0.5kb upstream 500 false Chr02: 13730974-13731473 Glycine max
Glyma.02G132500 0.5kb downstream 0.5kb downstream 1562 true Chr02: 13731474-13733035 Glycine max
Glyma.02G132500 0.5kb downstream 0.5kb downstream 500 false Chr02: 13732536-13733035 Glycine max
Glyma.02G132500 1.0kb upstream 1.0kb upstream 2062 true Chr02: 13730474-13732535 Glycine max
Glyma.02G132500 1.0kb upstream 1.0kb upstream 1000 false Chr02: 13730474-13731473 Glycine max
Glyma.02G132500 1.0kb downstream 1.0kb downstream 2062 true Chr02: 13731474-13733535 Glycine max
Glyma.02G132500 1.0kb downstream 1.0kb downstream 1000 false Chr02: 13732536-13733535 Glycine max
Glyma.02G132500 2.0kb upstream 2.0kb upstream 3062 true Chr02: 13729474-13732535 Glycine max
Glyma.02G132500 2.0kb upstream 2.0kb upstream 2000 false Chr02: 13729474-13731473 Glycine max
Glyma.02G132500 2.0kb downstream 2.0kb downstream 3062 true Chr02: 13731474-13734535 Glycine max
Glyma.02G132500 2.0kb downstream 2.0kb downstream 2000 false Chr02: 13732536-13734535 Glycine max
Glyma.02G132500 5.0kb upstream 5.0kb upstream 6062 true Chr02: 13726474-13732535 Glycine max
Glyma.02G132500 5.0kb upstream 5.0kb upstream 5000 false Chr02: 13726474-13731473 Glycine max
Glyma.02G132500 5.0kb downstream 5.0kb downstream 6062 true Chr02: 13731474-13737535 Glycine max
Glyma.02G132500 5.0kb downstream 5.0kb downstream 5000 false Chr02: 13732536-13737535 Glycine max
Glyma.02G132500 10.0kb upstream 10.0kb upstream 11062 true Chr02: 13721474-13732535 Glycine max
Glyma.02G132500 10.0kb upstream 10.0kb upstream 10000 false Chr02: 13721474-13731473 Glycine max
Glyma.02G132500 10.0kb downstream 10.0kb downstream 11062 true Chr02: 13731474-13742535 Glycine max
Glyma.02G132500 10.0kb downstream 10.0kb downstream 10000 false Chr02: 13732536-13742535 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122298754 5265 Fabidae View MSA
124073164 5270 Rosid View MSA
123751106 5271 Pentapetalae View MSA
122797584 5272 Eudicot View MSA
122050930 5273 Angiosperm View MSA
123428898 5275 Viridiplantae View MSA
121351000 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.245784 0.0 0.96255    
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.33423 0.0 1.2968    
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0417619 0.0 0.178972 Low Low
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 19.521     High High
cufflinks 7.916     High  
cufflinks 2.058        
cufflinks 1.08        
cufflinks 0.051     Low Low
cufflinks 1.46        
cufflinks 0.365        
cufflinks 411.227     High High
cufflinks 1.842        
cufflinks 0.045     Low Low
cufflinks 0.132        
cufflinks 4.785        
cufflinks 0.029     Low Low
cufflinks 1.183        
cufflinks 3.622        
cufflinks 0.214        
cufflinks 18.328     High High

0 Strain