Gene : Glyma.02G137600 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR13077:SF6 - 15 KDA SELENOPROTEIN Genomic Order:  1376
Name:  ? Glyma.02G137600 Secondary Identifier:  ? PAC:30510028
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.02G137600 0.5kb upstream 0.5kb upstream 3521 true Chr02: 14228005-14231525 Glycine max
Glyma.02G137600 0.5kb upstream 0.5kb upstream 500 false Chr02: 14231026-14231525 Glycine max
Glyma.02G137600 0.5kb downstream 0.5kb downstream 3521 true Chr02: 14227505-14231025 Glycine max
Glyma.02G137600 0.5kb downstream 0.5kb downstream 500 false Chr02: 14227505-14228004 Glycine max
Glyma.02G137600 1.0kb upstream 1.0kb upstream 4021 true Chr02: 14228005-14232025 Glycine max
Glyma.02G137600 1.0kb upstream 1.0kb upstream 1000 false Chr02: 14231026-14232025 Glycine max
Glyma.02G137600 1.0kb downstream 1.0kb downstream 4021 true Chr02: 14227005-14231025 Glycine max
Glyma.02G137600 1.0kb downstream 1.0kb downstream 1000 false Chr02: 14227005-14228004 Glycine max
Glyma.02G137600 2.0kb upstream 2.0kb upstream 5021 true Chr02: 14228005-14233025 Glycine max
Glyma.02G137600 2.0kb upstream 2.0kb upstream 2000 false Chr02: 14231026-14233025 Glycine max
Glyma.02G137600 2.0kb downstream 2.0kb downstream 5021 true Chr02: 14226005-14231025 Glycine max
Glyma.02G137600 2.0kb downstream 2.0kb downstream 2000 false Chr02: 14226005-14228004 Glycine max
Glyma.02G137600 5.0kb upstream 5.0kb upstream 8021 true Chr02: 14228005-14236025 Glycine max
Glyma.02G137600 5.0kb upstream 5.0kb upstream 5000 false Chr02: 14231026-14236025 Glycine max
Glyma.02G137600 5.0kb downstream 5.0kb downstream 8021 true Chr02: 14223005-14231025 Glycine max
Glyma.02G137600 5.0kb downstream 5.0kb downstream 5000 false Chr02: 14223005-14228004 Glycine max
Glyma.02G137600 10.0kb upstream 10.0kb upstream 13021 true Chr02: 14228005-14241025 Glycine max
Glyma.02G137600 10.0kb upstream 10.0kb upstream 10000 false Chr02: 14231026-14241025 Glycine max
Glyma.02G137600 10.0kb downstream 10.0kb downstream 13021 true Chr02: 14218005-14231025 Glycine max
Glyma.02G137600 10.0kb downstream 10.0kb downstream 10000 false Chr02: 14218005-14228004 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122309098 5265 Fabidae View MSA
124066908 5270 Rosid View MSA
123736516 5271 Pentapetalae View MSA
122788983 5272 Eudicot View MSA
122044015 5273 Angiosperm View MSA
121346057 5274 Embryophyte View MSA
123424520 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 26.6521 0.0 71.1472 High  
cufflinks 30.5356 0.0 81.4765 High  
cufflinks 26.7068 0.0 71.2631 High  
cufflinks 25.2095 0.0 67.3258 High Low
cufflinks 39.3457 0.0 105.41 High  
cufflinks 46.4835 0.0 125.427 High High
cufflinks 41.7925 0.0 112.08 High High
cufflinks 28.9505 0.0 77.2363 High  
cufflinks 33.9274 0.0 90.6354 High  
cufflinks 9.791     High  
cufflinks 4.297       Low
cufflinks 8.534     High  
cufflinks 17.472     High High
cufflinks 23.861     High High
cufflinks 6.183     High  
cufflinks 9.344     High  
cufflinks 4.573       Low
cufflinks 11.201     High  
cufflinks 9.714     High  
cufflinks 9.37     High  
cufflinks 5.167       Low
cufflinks 9.042     High  
cufflinks 9.476     High  
cufflinks 4.956       Low
cufflinks 9.629     High  
cufflinks 6.118        

0 Strain