Gene : Glyma.19G018100 G. max Wm82.a2.v1
Defline:  (1 of 3) PTHR10869:SF55 - OXOGLUTARATE/IRON-DEPENDENT OXYGENASE Genomic Order:  181
Name:  ? Glyma.19G018100 Secondary Identifier:  ? PAC:30511834
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Genomics

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.19G018100 0.5kb upstream 0.5kb upstream 5417 true Chr19: 1861208-1866624 Glycine max
Glyma.19G018100 0.5kb upstream 0.5kb upstream 500 false Chr19: 1866125-1866624 Glycine max
Glyma.19G018100 0.5kb downstream 0.5kb downstream 5417 true Chr19: 1860708-1866124 Glycine max
Glyma.19G018100 0.5kb downstream 0.5kb downstream 500 false Chr19: 1860708-1861207 Glycine max
Glyma.19G018100 1.0kb upstream 1.0kb upstream 5917 true Chr19: 1861208-1867124 Glycine max
Glyma.19G018100 1.0kb upstream 1.0kb upstream 1000 false Chr19: 1866125-1867124 Glycine max
Glyma.19G018100 1.0kb downstream 1.0kb downstream 5917 true Chr19: 1860208-1866124 Glycine max
Glyma.19G018100 1.0kb downstream 1.0kb downstream 1000 false Chr19: 1860208-1861207 Glycine max
Glyma.19G018100 2.0kb upstream 2.0kb upstream 6917 true Chr19: 1861208-1868124 Glycine max
Glyma.19G018100 2.0kb upstream 2.0kb upstream 2000 false Chr19: 1866125-1868124 Glycine max
Glyma.19G018100 2.0kb downstream 2.0kb downstream 6917 true Chr19: 1859208-1866124 Glycine max
Glyma.19G018100 2.0kb downstream 2.0kb downstream 2000 false Chr19: 1859208-1861207 Glycine max
Glyma.19G018100 5.0kb upstream 5.0kb upstream 9917 true Chr19: 1861208-1871124 Glycine max
Glyma.19G018100 5.0kb upstream 5.0kb upstream 5000 false Chr19: 1866125-1871124 Glycine max
Glyma.19G018100 5.0kb downstream 5.0kb downstream 9917 true Chr19: 1856208-1866124 Glycine max
Glyma.19G018100 5.0kb downstream 5.0kb downstream 5000 false Chr19: 1856208-1861207 Glycine max
Glyma.19G018100 10.0kb upstream 10.0kb upstream 14917 true Chr19: 1861208-1876124 Glycine max
Glyma.19G018100 10.0kb upstream 10.0kb upstream 10000 false Chr19: 1866125-1876124 Glycine max
Glyma.19G018100 10.0kb downstream 10.0kb downstream 14917 true Chr19: 1851208-1866124 Glycine max
Glyma.19G018100 10.0kb downstream 10.0kb downstream 10000 false Chr19: 1851208-1861207 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122305359 5265 Fabidae View MSA
124068610 5270 Rosid View MSA
123740803 5271 Pentapetalae View MSA
122792927 5272 Eudicot View MSA
122045302 5273 Angiosperm View MSA
121349816 5274 Embryophyte View MSA
123428732 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 14.2562 0.0 38.4492    
cufflinks 12.1456 0.0 33.0389    
cufflinks 7.14074 0.0 20.31   Low
cufflinks 13.9416 0.0 37.635    
cufflinks 13.5193 0.0 36.57    
cufflinks 19.19 0.0 51.2695    
cufflinks 14.9338 0.0 40.1973    
cufflinks 13.7507 0.0 37.1214    
cufflinks 23.6459 0.0 63.0935 High High
cufflinks 4.379        
cufflinks 12.457     High High
cufflinks 2.932        
cufflinks 4.188        
cufflinks 5.05        
cufflinks 9.692     High High
cufflinks 3.483        
cufflinks 6.165     High  
cufflinks 3.804        
cufflinks 3.832        
cufflinks 2.902        
cufflinks 19.722     High High
cufflinks 3.043        
cufflinks 2.857        
cufflinks 8.338     High  
cufflinks 2.932        
cufflinks 9.423     High High

0 Strain