Gene : Glyma.02G148600 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR11088:SF30 - ADENYLATE ISOPENTENYLTRANSFERASE 3, CHLOROPLASTIC Genomic Order:  1486
Name:  ? Glyma.02G148600 Secondary Identifier:  ? PAC:30507236
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax PWY-2681 Glycine max pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.02G148600 0.5kb upstream 0.5kb upstream 1959 true Chr02: 15318773-15320731 Glycine max
Glyma.02G148600 0.5kb upstream 0.5kb upstream 500 false Chr02: 15318773-15319272 Glycine max
Glyma.02G148600 0.5kb downstream 0.5kb downstream 1959 true Chr02: 15319273-15321231 Glycine max
Glyma.02G148600 0.5kb downstream 0.5kb downstream 500 false Chr02: 15320732-15321231 Glycine max
Glyma.02G148600 1.0kb upstream 1.0kb upstream 2459 true Chr02: 15318273-15320731 Glycine max
Glyma.02G148600 1.0kb upstream 1.0kb upstream 1000 false Chr02: 15318273-15319272 Glycine max
Glyma.02G148600 1.0kb downstream 1.0kb downstream 2459 true Chr02: 15319273-15321731 Glycine max
Glyma.02G148600 1.0kb downstream 1.0kb downstream 1000 false Chr02: 15320732-15321731 Glycine max
Glyma.02G148600 2.0kb upstream 2.0kb upstream 3459 true Chr02: 15317273-15320731 Glycine max
Glyma.02G148600 2.0kb upstream 2.0kb upstream 2000 false Chr02: 15317273-15319272 Glycine max
Glyma.02G148600 2.0kb downstream 2.0kb downstream 3459 true Chr02: 15319273-15322731 Glycine max
Glyma.02G148600 2.0kb downstream 2.0kb downstream 2000 false Chr02: 15320732-15322731 Glycine max
Glyma.02G148600 5.0kb upstream 5.0kb upstream 6459 true Chr02: 15314273-15320731 Glycine max
Glyma.02G148600 5.0kb upstream 5.0kb upstream 5000 false Chr02: 15314273-15319272 Glycine max
Glyma.02G148600 5.0kb downstream 5.0kb downstream 6459 true Chr02: 15319273-15325731 Glycine max
Glyma.02G148600 5.0kb downstream 5.0kb downstream 5000 false Chr02: 15320732-15325731 Glycine max
Glyma.02G148600 10.0kb upstream 10.0kb upstream 11459 true Chr02: 15309273-15320731 Glycine max
Glyma.02G148600 10.0kb upstream 10.0kb upstream 10000 false Chr02: 15309273-15319272 Glycine max
Glyma.02G148600 10.0kb downstream 10.0kb downstream 11459 true Chr02: 15319273-15330731 Glycine max
Glyma.02G148600 10.0kb downstream 10.0kb downstream 10000 false Chr02: 15320732-15330731 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122304122 5265 Fabidae View MSA
124062328 5270 Rosid View MSA
123742235 5271 Pentapetalae View MSA
122793817 5272 Eudicot View MSA
122042275 5273 Angiosperm View MSA
121309945 5274 Embryophyte View MSA
123428607 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.664654 0.0 2.44915    
cufflinks 0.0758444 0.0 0.306239 Low  
cufflinks 0.0888329 0.0 0.356331 Low  
cufflinks 0.0920809 0.0 0.368664 Low  
cufflinks 0.370499 0.0 1.40216    
cufflinks 0.201621 0.0 0.784427 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0921578 0.0 0.369052 Low  
cufflinks 2.65023 0.0 8.63758   High
cufflinks 0.202        
cufflinks 0.763        
cufflinks 0.087     Low  
cufflinks 1.722       High
cufflinks 1.215       High
cufflinks 0.498        
cufflinks 0.108        
cufflinks 0.53        
cufflinks 0.301        
cufflinks 0.103        
cufflinks 0.035     Low Low
cufflinks 1.044       High
cufflinks 0.072     Low  
cufflinks 0.036     Low Low
cufflinks 0.259        
cufflinks 0.046     Low Low
cufflinks 1.362       High

0 Strain