Gene : Glyma.02G100700 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR12565//PTHR12565:SF139 - STEROL REGULATORY ELEMENT-BINDING PROTEIN Genomic Order:  1007
Name:  ? Glyma.02G100700 Secondary Identifier:  ? PAC:30506184
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.02G100700 0.5kb upstream 0.5kb upstream 4859 true Chr02: 9473688-9478546 Glycine max
Glyma.02G100700 0.5kb upstream 0.5kb upstream 500 false Chr02: 9473688-9474187 Glycine max
Glyma.02G100700 0.5kb downstream 0.5kb downstream 4859 true Chr02: 9474188-9479046 Glycine max
Glyma.02G100700 0.5kb downstream 0.5kb downstream 500 false Chr02: 9478547-9479046 Glycine max
Glyma.02G100700 1.0kb upstream 1.0kb upstream 5359 true Chr02: 9473188-9478546 Glycine max
Glyma.02G100700 1.0kb upstream 1.0kb upstream 1000 false Chr02: 9473188-9474187 Glycine max
Glyma.02G100700 1.0kb downstream 1.0kb downstream 5359 true Chr02: 9474188-9479546 Glycine max
Glyma.02G100700 1.0kb downstream 1.0kb downstream 1000 false Chr02: 9478547-9479546 Glycine max
Glyma.02G100700 2.0kb upstream 2.0kb upstream 6359 true Chr02: 9472188-9478546 Glycine max
Glyma.02G100700 2.0kb upstream 2.0kb upstream 2000 false Chr02: 9472188-9474187 Glycine max
Glyma.02G100700 2.0kb downstream 2.0kb downstream 6359 true Chr02: 9474188-9480546 Glycine max
Glyma.02G100700 2.0kb downstream 2.0kb downstream 2000 false Chr02: 9478547-9480546 Glycine max
Glyma.02G100700 5.0kb upstream 5.0kb upstream 9359 true Chr02: 9469188-9478546 Glycine max
Glyma.02G100700 5.0kb upstream 5.0kb upstream 5000 false Chr02: 9469188-9474187 Glycine max
Glyma.02G100700 5.0kb downstream 5.0kb downstream 9359 true Chr02: 9474188-9483546 Glycine max
Glyma.02G100700 5.0kb downstream 5.0kb downstream 5000 false Chr02: 9478547-9483546 Glycine max
Glyma.02G100700 10.0kb upstream 10.0kb upstream 14359 true Chr02: 9464188-9478546 Glycine max
Glyma.02G100700 10.0kb upstream 10.0kb upstream 10000 false Chr02: 9464188-9474187 Glycine max
Glyma.02G100700 10.0kb downstream 10.0kb downstream 14359 true Chr02: 9474188-9488546 Glycine max
Glyma.02G100700 10.0kb downstream 10.0kb downstream 10000 false Chr02: 9478547-9488546 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122311698 5265 Fabidae View MSA
124065415 5270 Rosid View MSA
123749080 5271 Pentapetalae View MSA
122789211 5272 Eudicot View MSA
122048947 5273 Angiosperm View MSA
121351451 5274 Embryophyte View MSA
123428440 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.744636 0.0 4.41046   High
cufflinks 0.0174757 0.0 0.085053 Low Low
cufflinks 0.103763 0.0 0.413345 Low  
cufflinks 0.247141 0.0 0.945331    
cufflinks 0.0263164 0.0 0.117449 Low Low
cufflinks 0.183027 0.0 1.30311 Low  
cufflinks 0.0393972 0.0 0.165617 Low  
cufflinks 0.302285 0.0 2.37094    
cufflinks 0.018     Low  
cufflinks 0.002     Low Low
cufflinks 0.025     Low  
cufflinks 0.079     Low High
cufflinks 0.106       High
cufflinks 0.011     Low  
cufflinks 0.061     Low  
cufflinks 0.003     Low Low
cufflinks 0.017     Low  
cufflinks 0.072     Low  
cufflinks 0.017     Low  
cufflinks 0.004     Low Low
cufflinks 0.052     Low  
cufflinks 0.086     Low High
cufflinks 0.007     Low  
cufflinks 0.055     Low  
cufflinks 0.022     Low  

0 Strain