Gene : Glyma.02G105800 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR12300:SF51 - HVA22-LIKE PROTEIN C Genomic Order:  1058
Name:  ? Glyma.02G105800 Secondary Identifier:  ? PAC:30507730
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.02G105800 0.5kb upstream 0.5kb upstream 3651 true Chr02: 10079032-10082682 Glycine max
Glyma.02G105800 0.5kb upstream 0.5kb upstream 500 false Chr02: 10082183-10082682 Glycine max
Glyma.02G105800 0.5kb downstream 0.5kb downstream 3651 true Chr02: 10078532-10082182 Glycine max
Glyma.02G105800 0.5kb downstream 0.5kb downstream 500 false Chr02: 10078532-10079031 Glycine max
Glyma.02G105800 1.0kb upstream 1.0kb upstream 4151 true Chr02: 10079032-10083182 Glycine max
Glyma.02G105800 1.0kb upstream 1.0kb upstream 1000 false Chr02: 10082183-10083182 Glycine max
Glyma.02G105800 1.0kb downstream 1.0kb downstream 4151 true Chr02: 10078032-10082182 Glycine max
Glyma.02G105800 1.0kb downstream 1.0kb downstream 1000 false Chr02: 10078032-10079031 Glycine max
Glyma.02G105800 2.0kb upstream 2.0kb upstream 5151 true Chr02: 10079032-10084182 Glycine max
Glyma.02G105800 2.0kb upstream 2.0kb upstream 2000 false Chr02: 10082183-10084182 Glycine max
Glyma.02G105800 2.0kb downstream 2.0kb downstream 5151 true Chr02: 10077032-10082182 Glycine max
Glyma.02G105800 2.0kb downstream 2.0kb downstream 2000 false Chr02: 10077032-10079031 Glycine max
Glyma.02G105800 5.0kb upstream 5.0kb upstream 8151 true Chr02: 10079032-10087182 Glycine max
Glyma.02G105800 5.0kb upstream 5.0kb upstream 5000 false Chr02: 10082183-10087182 Glycine max
Glyma.02G105800 5.0kb downstream 5.0kb downstream 8151 true Chr02: 10074032-10082182 Glycine max
Glyma.02G105800 5.0kb downstream 5.0kb downstream 5000 false Chr02: 10074032-10079031 Glycine max
Glyma.02G105800 10.0kb upstream 10.0kb upstream 13151 true Chr02: 10079032-10092182 Glycine max
Glyma.02G105800 10.0kb upstream 10.0kb upstream 10000 false Chr02: 10082183-10092182 Glycine max
Glyma.02G105800 10.0kb downstream 10.0kb downstream 13151 true Chr02: 10069032-10082182 Glycine max
Glyma.02G105800 10.0kb downstream 10.0kb downstream 10000 false Chr02: 10069032-10079031 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122311080 5265 Fabidae View MSA
124069874 5270 Rosid View MSA
123753411 5271 Pentapetalae View MSA
122797924 5272 Eudicot View MSA
122050358 5273 Angiosperm View MSA
121349779 5274 Embryophyte View MSA
123427624 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0512615 0.0 0.21845 Low Low
cufflinks 2.63622 0.0 9.10778   High
cufflinks 0.417272 0.0 1.60191    
cufflinks 0.148352 0.0 0.593877 Low  
cufflinks 0.351684 0.0 1.36603    
cufflinks 0.379298 0.0 1.46747    
cufflinks 0.0913882 0.0 0.37488 Low Low
cufflinks 1.20906 0.0 4.42007    
cufflinks 0.864179 0.0 3.21809    
cufflinks 0.744       High
cufflinks 0.013     Low Low
cufflinks 0.166        
cufflinks 0.112        
cufflinks 0.307        
cufflinks 0.012     Low Low
cufflinks 0.396        
cufflinks 0.132        
cufflinks 0.166        
cufflinks 1.075       High
cufflinks 0.144        
cufflinks 0.013     Low Low
cufflinks 0.164        
cufflinks 0.252        
cufflinks 0.018     Low Low
cufflinks 0.28        
cufflinks 0.037     Low  

0 Strain