Gene : Glyma.02G108500 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR31499:SF11 - HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN Genomic Order:  1085
Name:  ? Glyma.02G108500 Secondary Identifier:  ? PAC:30506877
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.02G108500 0.5kb upstream 0.5kb upstream 2857 true Chr02: 10349252-10352108 Glycine max
Glyma.02G108500 0.5kb upstream 0.5kb upstream 500 false Chr02: 10351609-10352108 Glycine max
Glyma.02G108500 0.5kb downstream 0.5kb downstream 2857 true Chr02: 10348752-10351608 Glycine max
Glyma.02G108500 0.5kb downstream 0.5kb downstream 500 false Chr02: 10348752-10349251 Glycine max
Glyma.02G108500 1.0kb upstream 1.0kb upstream 3357 true Chr02: 10349252-10352608 Glycine max
Glyma.02G108500 1.0kb upstream 1.0kb upstream 1000 false Chr02: 10351609-10352608 Glycine max
Glyma.02G108500 1.0kb downstream 1.0kb downstream 3357 true Chr02: 10348252-10351608 Glycine max
Glyma.02G108500 1.0kb downstream 1.0kb downstream 1000 false Chr02: 10348252-10349251 Glycine max
Glyma.02G108500 2.0kb upstream 2.0kb upstream 4357 true Chr02: 10349252-10353608 Glycine max
Glyma.02G108500 2.0kb upstream 2.0kb upstream 2000 false Chr02: 10351609-10353608 Glycine max
Glyma.02G108500 2.0kb downstream 2.0kb downstream 4357 true Chr02: 10347252-10351608 Glycine max
Glyma.02G108500 2.0kb downstream 2.0kb downstream 2000 false Chr02: 10347252-10349251 Glycine max
Glyma.02G108500 5.0kb upstream 5.0kb upstream 7357 true Chr02: 10349252-10356608 Glycine max
Glyma.02G108500 5.0kb upstream 5.0kb upstream 5000 false Chr02: 10351609-10356608 Glycine max
Glyma.02G108500 5.0kb downstream 5.0kb downstream 7357 true Chr02: 10344252-10351608 Glycine max
Glyma.02G108500 5.0kb downstream 5.0kb downstream 5000 false Chr02: 10344252-10349251 Glycine max
Glyma.02G108500 10.0kb upstream 10.0kb upstream 12357 true Chr02: 10349252-10361608 Glycine max
Glyma.02G108500 10.0kb upstream 10.0kb upstream 10000 false Chr02: 10351609-10361608 Glycine max
Glyma.02G108500 10.0kb downstream 10.0kb downstream 12357 true Chr02: 10339252-10351608 Glycine max
Glyma.02G108500 10.0kb downstream 10.0kb downstream 10000 false Chr02: 10339252-10349251 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121791710 5273 Angiosperm View MSA
122309640 5265 Fabidae View MSA
124067697 5270 Rosid View MSA
123742453 5271 Pentapetalae View MSA
122786457 5272 Eudicot View MSA
123428935 5275 Viridiplantae View MSA
121350891 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.17272 0.0 12.9995    
cufflinks 6.085 0.0 23.4585    
cufflinks 1.29198 0.0 5.11702    
cufflinks 4.15015 0.0 17.8531    
cufflinks 0.888663 0.0 5.02035    
cufflinks 0.420689 0.0 2.06516   Low
cufflinks 1.53343 0.0 5.78173    
cufflinks 8.48164 0.0 30.4841   High
cufflinks 4.76671 0.0 19.604    
cufflinks 1.783        
cufflinks 0.154       Low
cufflinks 1.224        
cufflinks 0.561        
cufflinks 0.363        
cufflinks 0.224        
cufflinks 2.066       High
cufflinks 0.176       Low
cufflinks 0.583        
cufflinks 2.694       High
cufflinks 1.714        
cufflinks 0.198       Low
cufflinks 2.093       High
cufflinks 2.588       High
cufflinks 0.211       Low
cufflinks 1.991        
cufflinks 0.16       Low

0 Strain