Gene : Glyma.19G011200 G. max Wm82.a2.v1
Defline:  (1 of 6) PTHR14155:SF128 - RING-H2 FINGER PROTEIN ATL46 Genomic Order:  112
Name:  ? Glyma.19G011200 Secondary Identifier:  ? PAC:30511599
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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.19G011200 0.5kb upstream 0.5kb upstream 3367 true Chr19: 1082886-1086252 Glycine max
Glyma.19G011200 0.5kb upstream 0.5kb upstream 500 false Chr19: 1085753-1086252 Glycine max
Glyma.19G011200 0.5kb downstream 0.5kb downstream 3367 true Chr19: 1082386-1085752 Glycine max
Glyma.19G011200 0.5kb downstream 0.5kb downstream 500 false Chr19: 1082386-1082885 Glycine max
Glyma.19G011200 1.0kb upstream 1.0kb upstream 3867 true Chr19: 1082886-1086752 Glycine max
Glyma.19G011200 1.0kb upstream 1.0kb upstream 1000 false Chr19: 1085753-1086752 Glycine max
Glyma.19G011200 1.0kb downstream 1.0kb downstream 3867 true Chr19: 1081886-1085752 Glycine max
Glyma.19G011200 1.0kb downstream 1.0kb downstream 1000 false Chr19: 1081886-1082885 Glycine max
Glyma.19G011200 2.0kb upstream 2.0kb upstream 4867 true Chr19: 1082886-1087752 Glycine max
Glyma.19G011200 2.0kb upstream 2.0kb upstream 2000 false Chr19: 1085753-1087752 Glycine max
Glyma.19G011200 2.0kb downstream 2.0kb downstream 4867 true Chr19: 1080886-1085752 Glycine max
Glyma.19G011200 2.0kb downstream 2.0kb downstream 2000 false Chr19: 1080886-1082885 Glycine max
Glyma.19G011200 5.0kb upstream 5.0kb upstream 7867 true Chr19: 1082886-1090752 Glycine max
Glyma.19G011200 5.0kb upstream 5.0kb upstream 5000 false Chr19: 1085753-1090752 Glycine max
Glyma.19G011200 5.0kb downstream 5.0kb downstream 7867 true Chr19: 1077886-1085752 Glycine max
Glyma.19G011200 5.0kb downstream 5.0kb downstream 5000 false Chr19: 1077886-1082885 Glycine max
Glyma.19G011200 10.0kb upstream 10.0kb upstream 12867 true Chr19: 1082886-1095752 Glycine max
Glyma.19G011200 10.0kb upstream 10.0kb upstream 10000 false Chr19: 1085753-1095752 Glycine max
Glyma.19G011200 10.0kb downstream 10.0kb downstream 12867 true Chr19: 1072886-1085752 Glycine max
Glyma.19G011200 10.0kb downstream 10.0kb downstream 10000 false Chr19: 1072886-1082885 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041020 5273 Angiosperm View MSA
122309765 5265 Fabidae View MSA
124071790 5270 Rosid View MSA
123752396 5271 Pentapetalae View MSA
122790664 5272 Eudicot View MSA
123429130 5275 Viridiplantae View MSA
121351603 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 6.66303 0.0 27.1791    
cufflinks 8.21194 0.0 32.0705    
cufflinks 8.19552 0.0 38.18    
cufflinks 5.54911 0.0 25.832    
cufflinks 5.42084 0.0 23.377    
cufflinks 5.69086 0.0 21.4035    
cufflinks 3.7041 0.0 13.5604   Low
cufflinks 14.5607 0.0 63.702   High
cufflinks 5.74909 0.0 24.1068    
cufflinks 1.507        
cufflinks 0.163       Low
cufflinks 1.36        
cufflinks 1.133        
cufflinks 1.071        
cufflinks 0.096       Low
cufflinks 1.119        
cufflinks 0.379        
cufflinks 1.04        
cufflinks 1.527        
cufflinks 1.337        
cufflinks 0.126       Low
cufflinks 1.583        
cufflinks 1.328        
cufflinks 0.283        
cufflinks 1.193        
cufflinks 0.156       Low

0 Strain