Gene : Glyma.19G012000 G. max Wm82.a2.v1
Defline:  (1 of 3) PTHR36039:SF2 - GENOMIC DNA, CHROMOSOME 3, P1 CLONE:MMG15 Genomic Order:  120
Name:  ? Glyma.19G012000 Secondary Identifier:  ? PAC:30514446
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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.19G012000 0.5kb upstream 0.5kb upstream 2928 true Chr19: 1152228-1155155 Glycine max
Glyma.19G012000 0.5kb upstream 0.5kb upstream 500 false Chr19: 1154656-1155155 Glycine max
Glyma.19G012000 0.5kb downstream 0.5kb downstream 2928 true Chr19: 1151728-1154655 Glycine max
Glyma.19G012000 0.5kb downstream 0.5kb downstream 500 false Chr19: 1151728-1152227 Glycine max
Glyma.19G012000 1.0kb upstream 1.0kb upstream 3428 true Chr19: 1152228-1155655 Glycine max
Glyma.19G012000 1.0kb upstream 1.0kb upstream 1000 false Chr19: 1154656-1155655 Glycine max
Glyma.19G012000 1.0kb downstream 1.0kb downstream 3428 true Chr19: 1151228-1154655 Glycine max
Glyma.19G012000 1.0kb downstream 1.0kb downstream 1000 false Chr19: 1151228-1152227 Glycine max
Glyma.19G012000 2.0kb upstream 2.0kb upstream 4428 true Chr19: 1152228-1156655 Glycine max
Glyma.19G012000 2.0kb upstream 2.0kb upstream 2000 false Chr19: 1154656-1156655 Glycine max
Glyma.19G012000 2.0kb downstream 2.0kb downstream 4428 true Chr19: 1150228-1154655 Glycine max
Glyma.19G012000 2.0kb downstream 2.0kb downstream 2000 false Chr19: 1150228-1152227 Glycine max
Glyma.19G012000 5.0kb upstream 5.0kb upstream 7428 true Chr19: 1152228-1159655 Glycine max
Glyma.19G012000 5.0kb upstream 5.0kb upstream 5000 false Chr19: 1154656-1159655 Glycine max
Glyma.19G012000 5.0kb downstream 5.0kb downstream 7428 true Chr19: 1147228-1154655 Glycine max
Glyma.19G012000 5.0kb downstream 5.0kb downstream 5000 false Chr19: 1147228-1152227 Glycine max
Glyma.19G012000 10.0kb upstream 10.0kb upstream 12428 true Chr19: 1152228-1164655 Glycine max
Glyma.19G012000 10.0kb upstream 10.0kb upstream 10000 false Chr19: 1154656-1164655 Glycine max
Glyma.19G012000 10.0kb downstream 10.0kb downstream 12428 true Chr19: 1142228-1154655 Glycine max
Glyma.19G012000 10.0kb downstream 10.0kb downstream 10000 false Chr19: 1142228-1152227 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122308953 5265 Fabidae View MSA
124064557 5270 Rosid View MSA
123737242 5271 Pentapetalae View MSA
122793388 5272 Eudicot View MSA
122048746 5273 Angiosperm View MSA
121311093 5274 Embryophyte View MSA
123348440 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 25.714 0.0 90.8045 High  
cufflinks 16.7208 0.0 61.3304   Low
cufflinks 38.4833 0.0 138.921 High High
cufflinks 23.1614 0.0 82.8157 High  
cufflinks 21.6704 0.0 77.9322 High  
cufflinks 20.503 0.0 73.2601    
cufflinks 15.5966 0.0 57.7419   Low
cufflinks 23.619 0.0 83.3971 High  
cufflinks 20.8616 0.0 74.8199 High  
cufflinks 2.29        
cufflinks 1.37       Low
cufflinks 3.738       High
cufflinks 2.964        
cufflinks 3.54        
cufflinks 2.234        
cufflinks 2.691        
cufflinks 0.774       Low
cufflinks 3.671       High
cufflinks 3.007        
cufflinks 2.846        
cufflinks 1.542        
cufflinks 2.873        
cufflinks 3.465        
cufflinks 1.883        
cufflinks 2.476        
cufflinks 1.186       Low

0 Strain