Protein Family : RNA ligase/cyclic nucleotide phosphodiesterase family protein 122048746

Method ID:  5273 Method Name:  Angiosperm
Sequence Alignment:  View MSA Member Count:  76

76 Genes

Primary Identifier Defline Organism Name Symbol Length Chromosome Location
29822.t000055 (1 of 1) PTHR36039//PTHR36039:SF2 - FAMILY NOT NAMED // GENOMIC DNA, CHROMOSOME 3, P1 CLONE:MMG15 R. communis v0.1 552   29822: 274429-274980
Cucsa.158920 (1 of 1) PTHR36039:SF2 - GENOMIC DNA, CHROMOSOME 3, P1 CLONE:MMG15 C. sativus v1.0 571   scaffold01142: 952322-952892
orange1.1g040775m.g (1 of 1) PTHR36039:SF2 - GENOMIC DNA, CHROMOSOME 3, P1 CLONE:MMG15 C. sinensis v1.1 552   scaffold00028: 641080-641631
AT5G40190 (1 of 2) PTHR36039//PTHR36039:SF2 - FAMILY NOT NAMED // GENOMIC DNA, CHROMOSOME 3, P1 CLONE:MMG15 A. thaliana TAIR10 772   Chr5: 16069177-16069948
AT3G28140 (1 of 2) PTHR36039//PTHR36039:SF2 - FAMILY NOT NAMED // GENOMIC DNA, CHROMOSOME 3, P1 CLONE:MMG15 A. thaliana TAIR10 988   Chr3: 10470401-10471388
Thhalv10027951m.g (1 of 2) PTHR36039:SF2 - GENOMIC DNA, CHROMOSOME 3, P1 CLONE:MMG15 E. salsugineum v1.0 895   scaffold_14: 3695670-3696564
Thhalv10005667m.g (1 of 2) PTHR36039:SF2 - GENOMIC DNA, CHROMOSOME 3, P1 CLONE:MMG15 E. salsugineum v1.0 552   scaffold_6: 5723438-5723989
Ciclev10016872m.g (1 of 1) PTHR36039:SF2 - GENOMIC DNA, CHROMOSOME 3, P1 CLONE:MMG15 C. clementina v1.0 1505   scaffold_2: 8750430-8751934
Lus10039437.g (1 of 4) PTHR36039:SF2 - GENOMIC DNA, CHROMOSOME 3, P1 CLONE:MMG15 L. usitatissimum v1.0 549   scaffold33: 1636161-1636709
Lus10039477.g (1 of 4) PTHR36039:SF2 - GENOMIC DNA, CHROMOSOME 3, P1 CLONE:MMG15 L. usitatissimum v1.0 549   scaffold33: 2065538-2066086
Lus10032164.g (1 of 4) PTHR36039:SF2 - GENOMIC DNA, CHROMOSOME 3, P1 CLONE:MMG15 L. usitatissimum v1.0 561   scaffold42: 1199048-1199608
Lus10014523.g (1 of 4) PTHR36039:SF2 - GENOMIC DNA, CHROMOSOME 3, P1 CLONE:MMG15 L. usitatissimum v1.0 561   scaffold107: 128833-129393
Gorai.012G059600 (1 of 3) PTHR36039:SF2 - GENOMIC DNA, CHROMOSOME 3, P1 CLONE:MMG15 G. raimondii v2.1 2949   Chr12: 8360879-8363827
Gorai.006G028500 (1 of 3) PTHR36039:SF2 - GENOMIC DNA, CHROMOSOME 3, P1 CLONE:MMG15 G. raimondii v2.1 4042   Chr06: 7295150-7299191
Gorai.011G096000 (1 of 3) PTHR36039:SF2 - GENOMIC DNA, CHROMOSOME 3, P1 CLONE:MMG15 G. raimondii v2.1 1372   Chr11: 10577920-10579291
Thecc1EG016829 (1 of 1) PTHR36039//PTHR36039:SF2 - FAMILY NOT NAMED // GENOMIC DNA, CHROMOSOME 3, P1 CLONE:MMG15 T. cacao v1.1 3179   scaffold_4: 389440-392618
Migut.H00147 (1 of 2) PTHR36039:SF2 - GENOMIC DNA, CHROMOSOME 3, P1 CLONE:MMG15 M. guttatus v2.0 1334   scaffold_8: 717085-718418
Araha.16057s0007 (1 of 2) PTHR36039:SF2 - GENOMIC DNA, CHROMOSOME 3, P1 CLONE:MMG15 A. halleri v1.1 555   Scaffold16057: 55411-55965
Araha.8967s0002 (1 of 2) PTHR36039:SF2 - GENOMIC DNA, CHROMOSOME 3, P1 CLONE:MMG15 A. halleri v1.1 878   Scaffold8967: 5831-6708
Cagra.3936s0001 (1 of 2) PTHR36039:SF2 - GENOMIC DNA, CHROMOSOME 3, P1 CLONE:MMG15 C. grandiflora v1.1 510   Scaffold3936: 485-994
Cagra.8568s0004 (1 of 2) PTHR36039:SF2 - GENOMIC DNA, CHROMOSOME 3, P1 CLONE:MMG15 C. grandiflora v1.1 804   Scaffold8568: 17629-18432
Glyma.19G011900 (1 of 3) PTHR36039:SF2 - GENOMIC DNA, CHROMOSOME 3, P1 CLONE:MMG15 G. max Wm82.a2.v1 986   Chr19: 1148510-1149495
Glyma.19G012000 (1 of 3) PTHR36039:SF2 - GENOMIC DNA, CHROMOSOME 3, P1 CLONE:MMG15 G. max Wm82.a2.v1 2428   Chr19: 1152228-1154655
Brara.F03161 (1 of 1) PTHR36039:SF2 - GENOMIC DNA, CHROMOSOME 3, P1 CLONE:MMG15 B. rapa FPsc v1.3 1368   A06: 25003786-25005153
Bostr.3751s0016 (1 of 2) PTHR36039:SF2 - GENOMIC DNA, CHROMOSOME 3, P1 CLONE:MMG15 B. stricta v1.2 1284   Scaffold3751: 209247-210530
Bostr.0556s0480 (1 of 2) PTHR36039:SF2 - GENOMIC DNA, CHROMOSOME 3, P1 CLONE:MMG15 B. stricta v1.2 1107   Scaffold556: 2931620-2932726
Medtr6g007773 (1 of 1) PTHR36039:SF2 - GENOMIC DNA, CHROMOSOME 3, P1 CLONE:MMG15 M. truncatula Mt4.0v1 1031   chr6: 1961294-1962324
SapurV1A.0297s0220 (1 of 2) PTHR36039//PTHR36039:SF2 - FAMILY NOT NAMED // GENOMIC DNA, CHROMOSOME 3, P1 CLONE:MMG15 S. purpurea v1.0 1363   chr16: 21795428-21796790
SapurV1A.1642s0010 (1 of 2) PTHR36039//PTHR36039:SF2 - FAMILY NOT NAMED // GENOMIC DNA, CHROMOSOME 3, P1 CLONE:MMG15 S. purpurea v1.0 1179   chr16: 21790599-21791777
evm_27.TU.AmTr_v1.0_scaffold00088.73 (1 of 1) PTHR36039:SF2 - GENOMIC DNA, CHROMOSOME 3, P1 CLONE:MMG15 A. trichopoda v1.0 3294   AmTr_v1.0_scaffold00088: 1341600-1344893

76 Members

Protein Name Organism Name Cluster ID Cluster Name Same Organism Count Method ID Method Name
Cucsa.158920.1 C. sativus v1.0 122048746 RNA ligase/cyclic nucleotide phosphodiesterase family protein 1 5273 Angiosperm
orange1.1g040775m C. sinensis v1.1 122048746 RNA ligase/cyclic nucleotide phosphodiesterase family protein 1 5273 Angiosperm
AT3G28140.1 A. thaliana TAIR10 122048746 RNA ligase/cyclic nucleotide phosphodiesterase family protein 2 5273 Angiosperm
Thhalv10027951m E. salsugineum v1.0 122048746 RNA ligase/cyclic nucleotide phosphodiesterase family protein 2 5273 Angiosperm
Lus10039437 L. usitatissimum v1.0 122048746 RNA ligase/cyclic nucleotide phosphodiesterase family protein 4 5273 Angiosperm
Araha.8967s0002.1.p A. halleri v1.1 122048746 RNA ligase/cyclic nucleotide phosphodiesterase family protein 2 5273 Angiosperm
Cagra.3936s0001.1.p C. grandiflora v1.1 122048746 RNA ligase/cyclic nucleotide phosphodiesterase family protein 2 5273 Angiosperm
Cagra.8568s0004.1.p C. grandiflora v1.1 122048746 RNA ligase/cyclic nucleotide phosphodiesterase family protein 2 5273 Angiosperm
Glyma.19G011900.1.p G. max Wm82.a2.v1 122048746 RNA ligase/cyclic nucleotide phosphodiesterase family protein 2 5273 Angiosperm
Bostr.3751s0016.1.p B. stricta v1.2 122048746 RNA ligase/cyclic nucleotide phosphodiesterase family protein 2 5273 Angiosperm
evm_27.model.AmTr_v1.0_scaffold00088.73 A. trichopoda v1.0 122048746 RNA ligase/cyclic nucleotide phosphodiesterase family protein 1 5273 Angiosperm
Manes.15G180000.1.p M. esculenta v6.1 122048746 RNA ligase/cyclic nucleotide phosphodiesterase family protein 2 5273 Angiosperm
Kalax.0082s0051.1.p K. laxiflora v1.1 122048746 RNA ligase/cyclic nucleotide phosphodiesterase family protein 2 5273 Angiosperm
Kalax.0010s0067.1.p K. laxiflora v1.1 122048746 RNA ligase/cyclic nucleotide phosphodiesterase family protein 2 5273 Angiosperm
Bradi4g29280.3.p B. distachyon v3.1 122048746 RNA ligase/cyclic nucleotide phosphodiesterase family protein 1 5273 Angiosperm
Brast05G113200.1.p B. stacei v1.1 122048746 RNA ligase/cyclic nucleotide phosphodiesterase family protein 1 5273 Angiosperm
Aco002907.1 A. comosus v3 122048746 RNA ligase/cyclic nucleotide phosphodiesterase family protein 1 5273 Angiosperm
Aqcoe3G110000.1.p A. coerulea v3.1 122048746 RNA ligase/cyclic nucleotide phosphodiesterase family protein 1 5273 Angiosperm
LOC_Os09g20860.1 O. sativa v7.0 122048746 RNA ligase/cyclic nucleotide phosphodiesterase family protein 1 5273 Angiosperm
Zosma223g00460.1 Z. marina v2.2 122048746 RNA ligase/cyclic nucleotide phosphodiesterase family protein 1 5273 Angiosperm
Kaladp0053s0190.1.p K. fedtschenkoi v1.1 122048746 RNA ligase/cyclic nucleotide phosphodiesterase family protein 2 5273 Angiosperm
Tp57577_TGAC_v2_mRNA2317 T. pratense v2 122048746 RNA ligase/cyclic nucleotide phosphodiesterase family protein 1 5273 Angiosperm
Solyc02g081950.2.1 S. lycopersicum ITAG2.4 122048746 RNA ligase/cyclic nucleotide phosphodiesterase family protein 1 5273 Angiosperm
AUR62032092-RA C. quinoa v1.0 122048746 RNA ligase/cyclic nucleotide phosphodiesterase family protein 1 5273 Angiosperm
Phvul.004G019100.2.p P. vulgaris v2.1 122048746 RNA ligase/cyclic nucleotide phosphodiesterase family protein 2 5273 Angiosperm
Potri.001G350300.1.p P. trichocarpa v3.1 122048746 RNA ligase/cyclic nucleotide phosphodiesterase family protein 1 5273 Angiosperm
Podel.01G373200.1.p P. deltoides WV94 v2.1 122048746 RNA ligase/cyclic nucleotide phosphodiesterase family protein 1 5273 Angiosperm
PGSC0003DMP400012964 S. tuberosum v4.03 122048746 RNA ligase/cyclic nucleotide phosphodiesterase family protein 1 5273 Angiosperm
Pavir.2KG316100.1.p P. virgatum v4.1 122048746 RNA ligase/cyclic nucleotide phosphodiesterase family protein 1 5273 Angiosperm
Sobic.002G187300.1.p S. bicolor v3.1.1 122048746 RNA ligase/cyclic nucleotide phosphodiesterase family protein 1 5273 Angiosperm